Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35092 |
Symbol | |
ID | 7200493 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 35987 |
End bp | 37036 |
Gene Length | 1050 bp |
Protein Length | 317 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179778 |
Protein GI | 219117988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.341983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCTG ACGGTGCTAA TGCGTTTCGT GGTGCGCTCG GGCGGATTGG ATGGTCTGTT CCTGCGGCGA ACGTGTTTAC GAACAAAGGT TTTGATGCGA TGGACTCCCT TGGCTTGGTT ACTTGTGACC GTCTCAAGGA TATCTGCAAG ATCATTCGTC GCGGTACCGA TGGTGTGGCC TCAGTGCCAG CTGCTGGTGG AAACGCTGCG GTGGCGGCGG CGCCTGGCAC CCCTGGGATA GCGATCCCCA TGATGTGGGA GTACAAGCTA AGCGGAATGC ATCTCTGGGT GTCTGAGCGT CTCCGACAGG GGACTCCGGT TGTTGCGGCG GACTTTACTG CGGCTATCGG AAACCTGTAC ACCAGGAAGG TGCGTGAACT AGAAGAAGCG AAGGATGAGG AGGATGTTCA AGTCAAGCCT CCGGCTCCGT TCTCGAAGGA AACGAAGTAG ATTCCGTTCT TCAAGTTGTT GGTCAACTAT TTGAGCTCCG TGACGGGTGT TAACAAAGTG CCATTGGATT ATGTCGTCCG GAAAGATGAC AACGTCGCTG CACCGGATAC CGAGTTCGAG ACGGAGCACG AGAAGTTGGT GCTGTTGACT CCCCATACGG GGACGGCGTT CGACAAGGGC AACGGGAAAG TTTGGATCCA GGTGAAACAG TTGACTGTAA ACGGTCCAGC GTGGACTTAT GTTGCGCCTT TCGAGAAGAA ACGCGACGGT CGTGGAGCGG TCAAGGCTTT GAATAGTCAC TATGAAGCTG ATGCGGTGAT GTCCAAGTCC AAGGCGGCTG CATTCGATGT GCTCGAGCAT ACCACCTACA CTGGCGAGCG TCGTAACTTT GGGATGGAAA AGTACACAAA TGCTTTGTCA ATGGCGTTCC AGACTCTTGA CACGTACGGC GAGACATTGA CGGAGTGTCC AGGAAGGAGG ATGTCTTCTT GCGCAATCAC CATTGCACAG ATCCTAAGAT GCTCTCGGGA TGTCACGGTA TCCTACCTAA TGACATGTCT TGTGGACATA CAATGTACAA GGATGGAGAT CCACGTGTGA
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Protein sequence | MAADGANAFR GALGRIGWSV PAANVFTNKG FDAMDSLGLV TCDRLKDICK IIRRGTDGVA SVPAAGGNAA VAAAPGTPGI AIPMMWEYKL SGMHLWVSER LRQGTPVVAA DFTAAIGNLY TRKLLVNYLS SVTGVNKVPL DYVVRKDDNV AAPDTEFETE HEKLVLLTPH TGTAFDKGNG KVWIQVKQLT VNGPAWTYVA PFEKKRDGRG AVKALNSHYE ADAVMSKSKA AAFDVLEHTT YTGERRNFGM EKYTNALSMA FQTLDTYGET LTECPGRRMS SCAITIAQIL RCSRDVTVSY LMTCLVDIQC TRMEIHV
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