Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_35090 |
Symbol | |
ID | 7200522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | - |
Start bp | 27735 |
End bp | 28532 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | |
GC content | 56% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179776 |
Protein GI | 219117984 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0841816 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGATGG GTAGAGTAAG GAGTAGGGTG GCCCTCGCGT GGTGTTGGAT CGCGGCATTT GTGTGTGGTA CTTCCAACGC CTTTGTACCA CCGGTGTATT CGCACGCCTT TGAGCGTCCG GAAAAGCACA AGGCCGCCTT TCGCATCTCT ATGGTTCGAA ACATCGATCT TCCGGAATGC CTGGTCTTTT ACGGAGTCGA ATCCTTTCGT ACCAACGACG TTGGCTTGCG TAGTTTACTG GACGAATGCG AACAGACTGG GACAGCAGTG GTCCTGATTG GTAATCAAGC GCAGTTTACA GCTCCCTTGC TGACACCCGT ACAGTTCCGT GCGACAGTAC ACCCACCGCC AAACCCGTAC GATTTATTGG TCGCCTTGGA AAGTGTAACG ATCCAGCCTC GCCCCTTTGG CGGTTCGGCG GGATTTGGCC AAAAGCCGGC CGACCCGGAA CGTACCCCGC TGCCCGCCCG CACAGTCGTT CTTTGTACGA CACTAGACCA AACGCGTGCC GCCCGGGCCG TGGGAACACG TGTGGTGTGT TTGGAGGACA ACGATTTGGC GGACGCCGTA GTGGACGGCA TCGACTTTTG GTTGGACGAC ATTGCCACCC CCGGATCGTT TTGGTTGAAT CCTCCACACC CCAAAGACGA CCAAGGGAAC AAGGTCGATC CGGAATGGTT GGTAGAAAAC TATCTTCTAC CTGAACAGCA TGAGTGTGCA GACAGGATCG ACAATGGGAA AGATATAGAC GAGGACGACA TGCGCCGGAT ATTGGCCGAC CTGGCGCCTC TCCAGTGA
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Protein sequence | MGMGRVRSRV ALAWCWIAAF VCGTSNAFVP PVYSHAFERP EKHKAAFRIS MVRNIDLPEC LVFYGVESFR TNDVGLRSLL DECEQTGTAV VLIGNQAQFT APLLTPVQFR ATVHPPPNPY DLLVALESVT IQPRPFGGSA GFGQKPADPE RTPLPARTVV LCTTLDQTRA ARAVGTRVVC LEDNDLADAV VDGIDFWLDD IATPGSFWLN PPHPKDDQGN KVDPEWLVEN YLLPEQHECA DRIDNGKDID EDDMRRILAD LAPLQ
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