| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_27190 |
|---|
| Symbol | |
|---|
| ID | 7200660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011675 |
|---|
| Strand | - |
|---|
| Start bp | 736148 |
|---|
| End bp | 737406 |
|---|
| Gene Length | 1259 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179903 |
|---|
| Protein GI | 219118249 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GGACCATGAG CGACACCCGC GCTACAATTC TCGTTACCGG TGGCTGCGGC TACATTGGAA
CACACACCAT CGTCTGTCTT TTACAGAAGG ACTACGATGT TGTCGTGGCC GACAATCTTT
CCAACTCCAG TATCGTTAGT CTCGATCGTG TTGCCGAAAT TGTCGGACTC AGTGAGCACG
ACCGAGCTTC GCGTCTCGTC TTCCACCAAG TCGACATATG CGACGAAGCC GCGTTCCGTA
AAGTCTTTGA ATCTTCGCCT CGATTCGAAT CCTGTATTCA TTTTGCCGGT CTCAAGGTGC
GACAACCGAT CAGTGAACCT ACCCGAGATG CTTTCGATTT CCTTTTTCTC ATTCCAGTGT
GCGAGGGGGT CGGTCGAATC TATAGCCATC GATTTTCTCA CCGTTTCGTT TTTTCCCGCT
CAGGCCGTCG GAGAGAGTAC GAAAAAGCCT TTGCTGTACT ACGACAATAA TTTGTCGGGA
ACTTTCGTGC TCCTGCGTAT GATGGACGAG TTCCAGTGTC ACTCTTTGGT ATTTTCGTCG
TCGGCAACCG TCTACGGGGC TGCCGAGAAC ATGCCTATCA CGGAAGACAC ACCAGTAGGA
GCAGGCATTA CCAACGCCTA CGGACGTACC AAGTACATGA TCGAAGAAAT TCTGCGTGAC
TTTTACCAAT CGCAAACGCT GGAAGAAAGT ACCACGGACT GGTCCATTAC CATTCTGCGG
TACTTCAATC CTGTTGGTTC CCACCCCTCG GGAAAGATCG GCGAAGACCC GAACGGCATT
CCCAACAATC TCATGCCATA CGTGGCACAA GTTGCCATTG GACGACGTGA GCATCTGACC
GTTTTCGGGT CCGACTACAA CACGGCCGAC GGAACGGGAG TGCGCGATTA TTTGCACGTC
ATGGATTTGG CGGACGGCCA TCTCGCCGCG ATGGATTATA TGAAGCAAAA GAAAAGTGGT
ATTTTCACCT TCAACCTAGG CACCGGGAAC GGCTACTCCG TACTCGATAT GGTCAAAGCA
ATGGGCAAGG CCTGTGGACA CGAAATCAAG TATGTTGTTG GCAATCGGCG CCAAGGCGAC
ATTGCCACAT GCTTTGCTGA CGCAAATTTG GCCAAGAATG AGATGGGATG GGTTGCCTCT
AGGGATCTCG ACGAAATGTG TAGAGATTTG TGGTGTTGGC AGACCCAGAA CCCCAACGGG
TTTGCCGGAC AACCCTGTGA ATCGCAATAA TCCGCCGCAA AAAATAGTAT ACGTTACTT
|
|---|
| Protein sequence | MSDTRATILV TGGCGYIGTH TIVCLLQKDY DVVVADNLSN SSIVSLDRVA EIVGLSEHDR
ASRLVFHQVD ICDEAAFRKV FESSPRFESC IHFAGLKAVG ESTKKPLLYY DNNLSGTFVL
LRMMDEFQCH SLVFSSSATV YGAAENMPIT EDTPVGAGIT NAYGRTKYMI EEILRDFYQS
QTLEESTTDW SITILRYFNP VGSHPSGKIG EDPNGIPNNL MPYVAQVAIG RREHLTVFGS
DYNTADGTGV RDYLHVMDLA DGHLAAMDYM KQKKSGIFTF NLGTGNGYSV LDMVKAMGKA
CGHEIKYVVG NRRQGDIATC FADANLAKNE MGWVASRDLD EMCRDLWCWQ TQNPNGFAGQ
PCESQ
|
|---|
| |