Gene PHATRDRAFT_20034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_20034 
Symbol 
ID7200633 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp591475 
End bp592575 
Gene Length1101 bp 
Protein Length306 aa 
Translation table 
GC content46% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179678 
Protein GI219117779 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CCAGCTTCTA AGCAACCCCG AAACCAGTCT GAATTTGCTT TCATCAACCT TAACAAGAAG 
AGCTATGTAC GGACAGGTAG TTGTCGGACC TCCAGGAAGT GGCAAAACCA CTTTTTGCGA
CGGGTACGTG AATCGGGGTC TGCGCACTTA CTGTTTTTCG TTTCCTCACA TCTCATATTT
GAGCAAAGCA TGCAACAGTA CCTTCGGCTT CTGGGTCGGG ATGCGTGGGT TTTGAACTTA
GACCCTGCGA ATGAAGGGGG ATCTGTAAAT GGCGGAACGG GAACGACCGA AGAAAATGTG
GACGAAATCG AATCAAAATC ACAATTGCCG TACGAAACTA TTTTTGATGT CTGCGAAGAA
GTTGTTAATC TTTCCTCCGT TATGAAAAAA ACAGGCCTGG GGCCCAATGG AGGACTAATA
TATTGCATGG AATATATGGA GGCGCATGTC GGCGATATTA TTCTCAAAAT TAATGAGAAA
CTGAAAGAAA AGACATACCT TCTCATTGAT CTCCCTGGAC AAGTGGAGCT GTACACACAT
TCCACATGTG TACAGCAGCT ATTGAGTAAA ATGATTAAAG CTTGGGACCT GCGATTGTCA
GCGGTGCAGC TTATTGATGC GCACTACTGC ACTGATGCAT CCAAGTTTCT TTCGGCGGCT
ATGTTGGGAA CGACAACCAT GCTGCGGCTC GAGCTTCCAA CCGTGAACGT ACTTAGTAAG
GTGGATTTGT TGTCCCGATA CGGTGATCTA CCGCTGCAGC TAGAATTCTT CACTGAGTGC
CATGATCTTG AAAGACTGGT CCCTTTTCTC GAGCATCAAG CCATGAATCA TTCAAAACAC
GACAACGAAT ATTCGAGTTC CGGAACGTCG GACTACGTTG AAGATCCCGA CTATCAAAGG
GCTCGCACGA AGCGGCGGAG CTCTATATTT TTCCAGAAGT ACGCCAAGCT TCACAATGCT
TTAGCCGAAG TTGTAGAAGA TTTCGGTCTA CTCTCGTTTC TCCCATTAAA TATAACAGAT
GCTGGAAGCG TTGGCCGTGT ATTGGCGAAA ATCGACAAAT GCAATGGCTA TGTATTTATG
GAAGGGTCCG TCCCGGGGGA T
 
Protein sequence
MYGQVVVGPP GSGKTTFCDG MQQYLRLLGR DAWVLNLDPA NEGGSVNGGT GTTEENVDEI 
ESKSQLPYET IFDVCEEVVN LSSVMKKTGL GPNGGLIYCM EYMEAHVGDI ILKINEKLKE
KTYLLIDLPG QVELYTHSTC VQQLLSKMIK AWDLRLSAVQ LIDAHYCTDA SKFLSAAMLG
TTTMLRLELP TVNVLSKVDL LSRYGDLPLQ LEFFTECHDL ERLVPFLEHQ AMNHSKHDNE
YSSSGTSIFF QKYAKLHNAL AEVVEDFGLL SFLPLNITDA GSVGRVLAKI DKCNGYVFME
GSVPGD