Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_12234 |
Symbol | |
ID | 7200397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011675 |
Strand | + |
Start bp | 771526 |
End bp | 772879 |
Gene Length | 1354 bp |
Protein Length | 336 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | GABAR1 G protein-coupled GABA receptor |
Protein accession | XP_002179712 |
Protein GI | 219117850 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACGA AGGTCGGAGG ACGTTTGTTT GAACCCGCCT TACCCGTCGT GGATGGATCT CCACCGACCG AACTAGAACT CGGCTTTCAA AGCACGCTGG ACGCCTTTAC GCAAACAAAT ATTCCTCTGG AACCAGCCGA AGGCATTCGC CGTCGCGAAA GGGTACTCAA CCGCATGGGT GAGCTGTGTA GGGACTGGAT TCGAACTGTC TGCATAAAGA AAGGCTTGTC GACGGACGTA GTGAACGTGG CGGGTGGGCA GTTGTTCACG TCTGGATCAT ACCGACTGGG TGTACACGAA CCTGGTGCCG ATATTGATAC CATTCTCGTC TCACCGAACG CGTGTCAGCG AATGGATTTT TTTGGAACCA CGATACTCTC AACCGTAGAA GGAGAAGAAG GCACTCGCGA TCCAACCAGT CTCGCCGAAC GAATTCGAAC ACACCCAGAC GTGACGAATT TTGTTCCTGT CGAATCTGCT GCCGTCCCCA TTCTGACTTT TGATTGGGAA GGAATTAACA TCGATTTGTT ATTTGCTCGT CTCAATACAG CGTCGGTTCC CCCTGACTTT GATATTGATA ACGACGCCGT TTTGGACGGC GCCGACGGGG CGACGGAAAA GTCGCTCAAT GGTCCGCGGG TCACCAACCT CATTGCTGCC CTCGTGTCGG GCACACCCCA ACGGTATCAA GTATTTCTAA CTGTTGTTCG GTGCGTTCGT AAGTGGGCCA AGGCCCGAGG CCTCTACAGC AACAAAATGG GCTACTGGGG AGGCGTGAAT ATCAATATTG GTGTCGCACT CGTCGTACAG CTGTACCCCA ACGCGTGCGG AGCCAGCCTC CTGCGTAAAT TTTTCCTCGT TTTTAAGACA TGGCGCTGGC CGCAGCCACT ATTACTCACG AAACCGCACG ACGCGGGCTA CGGTCTGCCG GTCTGGAGCG TGGCGACGGC AGTGCGCCAG GTAGCTCCAA TGATCACTCC AGCCTATCCT GCTATGAATT CGACTCTCGC CGTGTCGCGA CAGACGTTGC AAATTCTACA GGAAGAATTC AACCGTGGCC ACACAGTTGT AGACCAACTA TGGAAAGATT ACCAAAAGAA TCCGGCACAG GAGTTGAACT GGAATACCTT GTTCGAACCG TCTGATTTTT TTATTAACTA TCCGGTACGT TGTTCTTTGT TCGTCATCCT AGCAAGCTTT GTGCGTCGAA ACCGTACTAT CATTCAGTAA GGATTCTCAC ATTCTTCTCC CCCAGAATTA CCTGTCCTTA TGCATTGTTG GACCAACACA GGCAGAGGCA CAAGCTTGGG CTGGTTTTGT CGAATCGAGA CTCCGCAAAC TCGTTTCAGA CTTA
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Protein sequence | RERVLNRMGE LCRDWIRTVC IKKGLSTDVV NVAGGQLFTS GSYRLGVHEP GADIDTILVS PNACQRMDFF GTTILSTVEG EEGTRDPTSL AERIRTHPDV TNFVPVESAA VPILTFDWEG INIDLLFARL NTASVPPDFD IDNDAVLDGA DGATEKSLNG PRVTNLIAAL VSGTPQRYQV FLTVVRCVRK WAKARGLYSN KMGYWGGVNI NIGVALVVQL YPNACGASLL RKFFLVFKTW RWPQPLLLTK PHDAGYGLPV WSVATAVRQV APMITPAYPA MNSTLAVSRQ TLQILQEEFN RGHTVVDQLW KDYQKNPAQE LNWNTLFEPS DFFINY
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