Gene PHATRDRAFT_12095 details

Gene Information

• Locus tag: PHATRDRAFT_12095
• Symbol: Fru5_1
• ID: 7200689
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 194726
• End bp: 196806
• Gene Length: 2081 bp
• Protein Length: 521 aa
• GC content: 50%
• Product: frustulin 5
• Protein accession: XP_002179600
• Protein GI: 219117616

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGCTA GCGCTGGCGG TATCTCGACG GATGATGACG GCATCGATCA CGTACAGGCG 
GACGCTCTCG CCTCCGCCGG TACCATTTGT ACCTTTTCAG CCTCGCGCAA AGGCGTCGAC 
GCTCGGTCCC GAGATATTAA TGTTCAAAAC TTCACCCTTC AACACATGGG AGCCGTGCTG 
CTGGATGAAA CCGAGATTGT TCTTAATCAC GGCAATCGCT ACGGTTTGGT AGGACGCAAC 
GGATGTGGCA AGTCAACGCT TTTGCGAGCG CTGGGAGCCC GAGCCATTCC GATTCCGCGC 
GGTATTGATA TCTTCTTTTT GTCTGAAGAA GTGGAGCCAT CTGATACTAT GACGGCACTC 
GACGCGGTCA TGGCAGTTGA CGAAGAACGA TTGCGGCTCG AACAACAGGC CGACGAACTC 
AATCACTTGC TCGCGGCACT GGCTGACGCC AGTGTGAACG ACAGCGGTAA CAACGGTGTG 
AGTAGAGAGG ATAGCGAGGA CGATAAGACT CCGGAAGAGC AACAAGAAGA TGTCATGGAA 
GTGCTGAATG CGGTATATGA GCGTTTGGAC GCGCTGGACG CGAGTACTGC GGAGGTCCGT 
GCGCGTTCTA TTCTAAAGGG CTTGGGCTTT ACACACGAAA TGCAGTCCAA GTTGACCAAG 
GACTTTTCCG GAGGATGGCG TATGCGTGTT TCCTTAGCGC GGGCCTTGTT CATTCAACCG 
GTATGCCTGC TACTCGACGA GCCCACGAAT CACTTGGATA TGGAGGCTGT TATTTGGTTG 
GAGGATTATC TTTCGAAATG GAACCGTATT CTGTTGCTGG TTTCACATTC GCAAGATTTT 
CTCAACAACG TTTGTTCGCA CATGATTCAC TTTACGAATA GAAAGCGATT GCAATACTAC 
GATGGCAACT ACGACCAGTT CATCAAAACG AAGTCGGAAA AGGAAGAGAA TCAGCTCAAA 
CAGTTCAAAT GGGAACAGGA ACAGATGAAG TCCATGAAAG AGTACATTGC GCGATTTGGC 
CACGGAACGT CCAAAAACGC TAAACAGGCG CAGTCGAAAG AAAAAGTTTT GCAAAAGATG 
ATCCGTGGGG GTTTGACCGA CAAACCAGAA GAAGAGAAAC CGCTTAATTT CAAATTCACT 
GATCCGGGAC ATTTACCACC ACCTGTTTTG GCCTTTCACA ACGTTTCTTT CGGTTATCCA 
AATTGTGAAA AGCTCTACAC CAACGTTAAT TTTGGTGTGG ATTTGGATTC TCGAGTGGCC 
TTAGTCGGTC CGAACGGAGC TGGAAAAGTG CGTCTGGGTG GAAGCTGGTC CTGAGCATCG 
CTCGCTGATA TATTACGCCT ACTAATACGA TTGTGCTTCT TCCTTTCACA GACTACGCTA 
ATGAAACTCA TGTCCAGCGA ATTGCAGCCA TCCATGGGTG ACATTCGACC CCACGGACAT 
TTGAAGCTCG GTCGATTTAC GCAGCATTTT GTGGACGTTT TGGATTTAGA CATGACGCCG 
CTCGAGTTTT TCGAGAGCAA GTATCCCAAC GACCCGCGGG AAGAACAGCG CAAATATTTG 
GGTCGTTTTG GAGTGTCGGG GCCGATGCAG GTGCAGAAAA TGAGGGAACT GTCCGACGGA 
CAAAAGTCTC GCGTCGTCTT TGCCAAGGTA GGATCGGATA CGGCATGAGC GGGACGCCGA 
GCAGTTCGAC GAATTCGGGA TGACGCATAT CTCTCACCTT TACTTATTTA TTTGGCTCAG 
CTTGGTCGCG ACGTTCCGCA CATTTTGCTG CTCGATGAGC CGACGAACCA CTTGGATATG 
GTACGCTGTG GGAGCTTGGA ATTGGGCAAA GGCGATTCCA AACGCATTCC AGCAACACTC 
ACGGTCGGTC TATCGTTCTC GACATTTTAC AGGAAAGCAT TGACGCGTTG GCTAAGGCAG 
TGAATGAATT CCAGGGTGGT TTGGTATTGG TGTCGCACGA TATGCGTTTG ATTGGTCAGG 
TGGCCAAGGA GATTTGGATA TGCGACAACA AAACGATAGC GATTCACCGG GGAGACATTC 
AGTCGTTCAA AATGGACATG CGCGCTGCCA TGGGCATTGA T 

 

Protein sequence

SRDINVQNFT LQHMGAVLLD ETEIVLNHGN RYGLVGRNGC GKSTLLRALG ARAIPIPRGI 
DIFFLSEEVE PSDTMTALDA VMADSEDDKT PEEQQEDVME VLNAVYERLD ALDASTAEVR 
ARSILKGLGF THEMQSKLTK DFSGGWRMRV SLARALFIQP VCLLLDEPTN HLDMEAVIWL 
EDYLSKWNRI LLLVSHSQDF LNNVCSHMIH FTNRKRLQYY DGNYDQFIKT KSEKEENQLK 
QFKWEQEQMK SMKEYIARFG HGTSKNAKQA QSKEKVLQKM IRGGLTDKPE EEKPLNFKFT 
DPGHLPPPVL AFHNVSFGYP NCEKLYTNVN FGVDLDSRVA LVGPNGAGKT TLMKLMSSEL 
QPSMGDIRPH GHLKLGRFTQ HFVDVLDLDM TPLEFFESKY PNDPREEQRK YLGRFGVSGP 
MQVQKMRELS DGQKSRVVFA KLGRDVPHIL LLDEPTNHLD MESIDALAKA VNEFQGGLVL 
VSHDMRLIGQ VAKEIWICDN KTIAIHRGDI QSFKMDMRAA M