Gene PHATRDRAFT_12043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_12043 
Symbol 
ID7200423 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011675 
Strand
Start bp900798 
End bp901671 
Gene Length874 bp 
Protein Length260 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179742 
Protein GI219117913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTCGTCG TCACTGGTGC CTCGCGGGGA ATTGGGCTTC AGTTTGTGAA GACTTTGATC 
CTTCGTGCTA GGGTGCGACA TCTCTTGTAT TTGTGGAATG GACTCGATCT TGCCTTTTTT
CCCTGTTTAG CTCACAATCT GTCTCTCGTG ATGCTTCGGC CAGGGAAGCA TTGTGGCGTG
TTGCCGATCT CCGGAAAAAG CTGAGCTGCT ACAAGAATTT ATTGCTACCT TAGAAGATCC
CCGTCGCATT CGCATTGTCT CTCTCGATTT GGAAGATCAA ACGTCCATTG AACGCGCTGG
AGCCGAAATA AAAGAAATGT TTGGCCGAGT CGACATGCTA CTCAATGTAG CGGGGCTTCT
GGGTGACGCC AAAACAACGC CTGGACCGGA ACGTTCGCTG GCGAAAGTTG AACGAGATTG
GTTTGAAAAG ACGTTGGCTA TTAACACAAT TGGACCAGTT ATGTTGTCAA AAGAACTGTC
GCCGTTGATG ATGCAGCGGC GCAAGCGAAA AAGTAGTGAC AACGATACTG AGACGCGAGC
TGTAGCCGTC ATTGCAAGCC TAAGTGCACG GGTGGGTTCT ATATCGGACA ACGGTTTGGG
AGGGTGGTAT AGTTACCGGA TGAGTAAATC GGCATTAAAT CAAGCGACAC GAACAATGGC
GTTGGAAATG AAGCGATGTT CAACCTGGTG TATTGCACTG CATCCCGGTA CGACGGATAC
GGACCTGAGT AAACCATTCC AGTCTAATGT CAAGGATGGA AGTCTATTCC CCGTTGACTT
TACAACGGAA AAGTTGATGA ATGTCATTGA CTCCATGACC GAAAACAATT CAGGCGGTCT
TTATGATTGG GCCGGCCAAG CCATTTCTTT TTGA
 
Protein sequence
VFVVTGASRG IGLQFVKTLI LRARGSIVAC CRSPEKAELL QEFIATLEDP RRIRIVSLDL 
EDQTSIERAG AEIKEMFGRV DMLLNVAGLL GDAKTTPGPE RSLAKVERDW FEKTLAINTI
GPVMLSKELS PLMMQRRKRK SSDNDTETRA VAVIASLSAR VGSISDNGLG GWYSYRMSKS
ALNQATRTMA LEMKRCSTWC IALHPGTTDT DLSKPFQSNV KDGSLFPVDF TTEKLMNVID
SMTENNSGGL YDWAGQAISF