Gene PHATRDRAFT_12028 details

Gene Information

• Locus tag: PHATRDRAFT_12028
• ID: 7200608
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011675
• Strand: +
• Start bp: 472776
• End bp: 474956
• Gene Length: 2181 bp
• Protein Length: 618 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002179653
• Protein GI: 219117726

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.400153
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCAACCTGC CTTTCCTCTT GAACAGATAC TTGCAGGAGT CAGGCTTTGT ACATTCAGCC 
TTCTCTTTTG CTCACGAAAG TATGTTAGGA AGGACTGGTT TACGCTCGGC GGATAAAGCT 
TTACCTCCGG GGGCACTGAT ATCTTTTTTG CAAAAGGGTC TACAATACGT TGGAATCGAG 
GAACGCCTTC GACATGACAG CACAGGAGGG AGAAAGGCTG CAACTGAGAC GGAAGGAGAC 
TTTTCTCTCC TTTCCCCTCT CACAGTGGCG ACATTGGCAA GGAAAAACCC TCCGATTCAG 
TTGAATGTGC CACCAGCGGC AGCAGCAGCT GCTATGAAGG CAAAGCTGGA AGTTGAATCA 
AAATTGCACG CTGAACGTAT GTCAAATGTG ATGGCTAGTC AGATTGCTAC GAGCGGACCG 
TTGGCTCCAA TCGGTCTACC ACCGGTAATG GATATTCAAA ATGCGCATTT CGCCAGGCAG 
GCATTGGCTG CGCAGGCAGC AGCAGCCCAC GCGGCTGCGG CTCTCAGCCA ACTGCAACAA 
TTAGGGCACC AACCTACAGC AGTATCCGAT TTGTTCTCCC AGCAAAAGCT GGCACAACCG 
CATGTCAATA CTGCCGCAGA GCTTATGGGT CTGCAAAAAA ATAACCTAGT CCAACAGGAA 
AGTACTGCTT CTTCTGGTGG AATAGATACA CTAGCCGTCA CTGCTCAAGG GGGGAAACGA 
GTCGCATCTG GGTCGAAACG AAGCATTAAG AAGCAAAAGA AGGATAAACC TGACCCAAGA 
AAAGGAAAAC TCATTGACGA TGCAAAGAAA AGTTTAGAAG GCAAAGAGTT GCATCCAATG 
GACGTTGAGG AAAACGACAA CCAGGCGGAC TCGGCTTCCT TTCCTGCTCA CAAAGGAAAC 
TCACCGCAGC CGCTACCAGC GCAGGAACCT TTGAATGGCC AGGCTGTGGA AATCAATGGA 
TCAACGGGGC AAACGACTAC TTCCGGGGTA AACGGTGGAC AGCATGAATT CACAAGGAAG 
AACGTTGACC AGCAGCAACA TTCCACTATC GATGTTGATA AAGAAGACGC CGCAACAGAC 
GTTTCTCCGA AAGAAATATT GAAATTGGAA ATGCATCAAT CTGAAGTCTT TATGTGTGCT 
TGGAATCCTG TATTTTCGGA TCTCATTGCC ACGGGTAGTG GTGACGCATC GGCGAGAATA 
TGGCAAATGC GTGGACTGTA TGCTGCTGCT GGATTGACTA CTGTGAAGTT GTTGCCGCAC 
GGCACCGACC CAAGAGATAA GAAGAATAAG GATGTTACAA CGCTTGAATG GTCGTCTGAT 
GGGTTGTTAT TGGCTACTGG AAGCTACGAT GGAGTTGCTC GTGTCTGGGC GCGCAATGGA 
GCCCTCATGC ATACGTTAAA GGGGCACAAC GGTCCTATTT TTTCGTTGAA ATGGAATAAG 
AGAGGGAATT TTCTGCTGTC CGGGAGTTAC GACAAAACAA CGATCGTTTG GGACGTTTCA 
GGACCAGCTG GGTTTGTGGA GCAACAATTT ACTGACCATC AAGCACCCGC TCTCGACGTC 
GACTGGAAGG ACGATGTGAC ATTCGCATCC TGCTCTACGG ACAAAACGGT CCACATATGC 
CGAGTAGGTG TACCCAAGCC CTTAAAAGTT TATTCAGGAC ATACAGACGA AGTAAATGCC 
GTGAAATGGG ATCCCTCAGG TCAGCTGCTA GCAAGTTGCT CGGACGATTG TACGGCCAAA 
GTTTGGGACG TGGAGTCTGA TCGCACAGAC CCGCTTCATG ACCTTACGAG CCACCAGCAG 
GAAATATACA CTGTAAAATG GAGCCCAACT GGTTCGGGTT CGAAAAATCC TTCGAAAAAA 
GCCGTTTTAG CGACGGCATC GTTCGATGGT TCAGTACGAC TTTGGGACGT AAAAGACGGT 
TCCTGCTACC GAGTTTTCAA TCGTCATCGA GACTCGGTGT ACTCGGTTGC CTTTTCACCG 
TCGGGGGACT ATCTTGCTAG CGGGTCTCTT GCTGGGCAAA TGTATATCTG GAATATTGAG 
GAAGGGCGTC ATATAAAGAG CTACAAGGGA AAGGGCGACA TTTTTGAAGT GGCATGGAAC 
AAAGAAGAGA CTCGAGTAGC TGCTTGCTTC TCATCGAATG TCGTTGCGGT GATCGACTTT 
GACAAAAGCA CAATCATATG A 

 

Protein sequence

INLPFLLNRY LQESGFVHSA FSFAHESMLG RTGLRSADKA LPPGALISFL QKGLQYVGIE 
ERLRHDSTGG RKAATETEGD FSLLSPLTLA QPHVNTAAEL MGLQKNNLVQ QESTASSGGI 
DTLAVTAQGG KRVASGSKRS IKKQKKDKPD PRKGKLIDDA KKSLEGKELH PMDVEENDNQ 
ADSASFPAHK GNSPQPLPAQ EPLNGQAVEI NGSTGQTTTS GVNGGQHEFT RKNVDQQQHS 
TIDVDKEDAA TDVSPKEILK LEMHQSEVFM CAWNPVFSDL IATGSGDASA RIWQMRGLYA 
AAGLTTVKLL PHGTDPRDKK NKDVTTLEWS SDGLLLATGS YDGVARVWAR NGALMHTLKG 
HNGPIFSLKW NKRGNFLLSG SYDKTTIVWD VSGPAGFVEQ QFTDHQAPAL DVDWKDDVTF 
ASCSTDKTVH ICRVGVPKPL KVYSGHTDEV NAVKWDPSGQ LLASCSDDCT AKVWDVESDR 
TDPLHDLTSH QQEIYTVKWS PTGSGSKNPS KKAVLATASF DGSVRLWDVK DGSCYRVFNR 
HRDSVYSVAF SPSGDYLASG SLAGQMYIWN IEEGRHIKSY KGKGDIFEVA WNKEETRVAA 
CFSSNVVAVI DFDKSTII