Gene PHATRDRAFT_55575 details

Gene Information

• Locus tag: PHATRDRAFT_55575
• ID: 7200293
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 168862
• End bp: 170860
• Gene Length: 1999 bp
• Protein Length: 593 aa
• GC content: 51%
• Product: nad-dependent epimerase/dehydratase
• Protein accession: XP_002179147
• Protein GI: 219116705

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CCTTGGAACA GCCACACGGA TATGCAATAA TCAATTTAGG TAGTGGCCGG GCCACACCGG 
TGACGGAACT TGCCAAACGC ATGGAGTCTG TGTTTGACGA TGAGCCCGAC GTGATCAACG 
ACCATGGTTC TTCCCCCGGA CCGTGCTGTG CCAGCATTTC CAAGGCACAG CACCTGCTAG 
GATATCAACC GCACACGTCC TGGAAGGAAG GTTTGGCCAA AACCCGGGAG TGGTACCAAA 
CGCGTTCCGT CAAACACCGT CGCATCTCGA CAAAAGACGC GGACAAAACA TTGGTGGCTG 
CTCAAATCCG GCCAACACCC ACCCGAGCGA CAACAAGAAC AAATTTGGTC GCCGCTCCGA 
GTGATTGGGA ACGCATTCCA AAGGTAGCTC CACACAATGG AACCAAAACG GTGCTCTTGA 
CCGGTGCCGC GGGGTTCATT GGGAGTCACG TAGCCGAAGG GCTCTTGGCC CGAGGCGACA 
CGGTTATTTT GGTGGACGAA GTCAACGACT ACTATGACGT GCGCATCAAA GAGTCCAATC 
TACAGTTGCT GCAGGAAACT TTCGGATCCG CCCGTCTCCG AATTTATCGA GGCGACCTGG 
CCAACGCATC TTTTATCAGT CGTGTCTTTG CCCGAGAAAA GCCTGAATGG GTCTGTCATT 
TGGCGGCACG CGCTGGTGTG CGGCCCTCAA TACAGAACCC CTATGTTTAC CTAAACTCCA 
ATATTGTCGG TACGATGCGA TTACTTGAAC TGAGTCGGAT CTACAATATT CAGAACTTTG 
TCTTTGCAAG TTCCAGTTCC GTTTACGGAG GGTCGCAATC GACACTGTTT TCGGAAGACG 
AACGCGTTGA CCGACCCATA TCCCCGTACG CTGCGACGAA GAAATCGTGC GAACTCATGG 
CCTACACGTA CCACCATCTC TACGGTCTAC CTGTGACGGC GTTACGATTT TTTACCGTCT 
ACGGCCCACG GGGACGTCCC GACATGGCAC CGTTCAAATT TGTGGACCGC GTCTCGCGCG 
GCTTGCCGCT CCAGCAATTT GGCGACGGTA GCAGTAGTCG GGACTATACT TATATTTCGG 
ATATTGTCGA TGGAGTCGTG CGCGCCATTG ATCGTCCCTA CGATTATCAG ATTCTCAATC 
TCGGCAAAGG ATCAGGAACG AAGCTTATTG AGTTTATTAA GCTGGTGCAA AAATATACTG 
GGAAGAATGC CACCATTCAG TATCTACCTG ATCAAGCCGG TGACGTGCCT TACACCTGTG 
CCGATGTGCG CAAAGCAGAG CACTTTCTCG GATACAAGCC AAAGGTTTCT TTTGAGGAAG 
GTATTCGTCT AACGGTGGAA TGGTTCTCGA AAACGTACGT TCCACAACAA AGCGTGAAGA 
AGGAGACAAA GCGTTCCTCT CCGAAGACGG CTAGTAAGCC GTCAAAAGGG AAAGCGAAGG 
GCAAGGCTCC GGCAAATAAG GCTCCCATTC GAAATTATCC AGCCAATTTT TCCGGATACA 
TGATGCCACC GGGCGGAGTC ATGCCGCCCG AGAAGAAGAA ATACCCGCTA GCTGGGGGAT 
ACGTTGTGCC GCCAGGTGCG ATAGACCCTG ATACAAATAT TGGTTACGCC TTTGGTGGCT 
CAATCGACGG CGCAACGTAT AAACCCACGG AAGTAGATTC TACCTCAATC TTTGACTTTT 
CGGTTGTGAA CCAGCAACTC AAGACCGTCA TCCAAAGTAA TGCGGAAAAG ATAGGCATCG 
TGGCTCTCGA TATGGCTTAC GTGCAGTGGC TTATCATTGG ATTTCTTGTT ACTTGCCGCA 
TCTTCTTGGG ACATCGGGTA CGAATTTGTC GGAACACTGG GCAATCTCTG CACCGAGCAT 
GAGTGATCTG TATTAATGAC TCATGGATAT TGGAAAGCGT ACTCCATCTA TATCGTCAAA 
ATCTATTGTA TACTCCCCCC ACTTTAACGC TTTTCAAATG CATTGCCAAC GGAGTATAGA 
CACAAATTGG AACTTCTGT 

 

Protein sequence

MESVFDDEPD VINDHGSSPG PCCASISKAQ HLLGYQPHTS WKEGLAKTRE WYQTRSVKHR 
RISTKDADKT LVAAQIRPTP TRATTRTNLV AAPSDWERIP KVAPHNGTKT VLLTGAAGFI 
GSHVAEGLLA RGDTVILVDE VNDYYDVRIK ESNLQLLQET FGSARLRIYR GDLANASFIS 
RVFAREKPEW VCHLAARAGV RPSIQNPYVY LNSNIVGTMR LLELSRIYNI QNFVFASSSS 
VYGGSQSTLF SEDERVDRPI SPYAATKKSC ELMAYTYHHL YGLPVTALRF FTVYGPRGRP 
DMAPFKFVDR VSRGLPLQQF GDGSSSRDYT YISDIVDGVV RAIDRPYDYQ ILNLGKGSGT 
KLIEFIKLVQ KYTGKNATIQ YLPDQAGDVP YTCADVRKAE HFLGYKPKVS FEEGIRLTVE 
WFSKTYVPQQ SVKKETKRSS PKTASKPSKG KAKGKAPANK APIRNYPANF SGYMMPPGGV 
MPPEKKKYPL AGGYVVPPGA IDPDTNIGYA FGGSIDGATY KPTEVDSTSI FDFSVVNQQL 
KTVIQSNAEK IGIVALDMAY VQWLIIGFLV TCRIFLGHRV RICRNTGQSL HRA