Gene PHATRDRAFT_51810 details

Gene Information

• Locus tag: PHATRDRAFT_51810
• Symbol: Rab18
• ID: 7200253
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 568341
• End bp: 569176
• Gene Length: 836 bp
• Protein Length: 213 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002179241
• Protein GI: 219116893

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGCTC CACCACCGCA AACGTTTCCG TACGATTACT TGTTCAAAGT TTTGATAATT 
GGGGATGCTT CGGTTGGAAA GGTGCGTTGT AACGGCTGAC CAATATCGAC AAAGTCGTTT 
TCCGTGCCCT TCAGTCCGTC CATACTGACA CTGTTGAGTG CGAACGTATG TTTGTACGCT 
TTTTATTGGT AGTCCTCTAT GCTGTTACGG TTTACGGACG ATTCGTTTGA CGAACACATT 
CAGTCCACGA TCGGGGTGGA CTTTAAAGTA AAGCACCTGG AAGTCGAGGG CAAACGAGTC 
AAGCTCACTA TTTGGGATAC CGCCGGACAG GAACGTTTCC GAACACTAAC TAGCAGCTAC 
TATCGCGGCG CCCACGGCGT TGTCTTGGTC TACGACGTGA CACGGACCGA TAGCTTTGAG 
AATTTGCAAC AGTGGTTAAA AGAGGTGCAG ATGTATTCGC CCGGGAACGG TGAATCCGTC 
GTCAAACTAC TCGTGGGCAA CAAGTGTGAT TTGGAACGTC AAGTGCCGTT TGAAGAGGCG 
GATGCCTGGG CGCGATCACA GGGTATGCTC TTTTTGGAAG CGTCCGCCAA GACACGACTG 
GGAATTCGAC AAGTGGTACG TGGACCGACC GTAGATGCCC CCTGCCTGCT TTTCGCCTCT 
TCGCCAATTC TCAACCAAAC TCATTGTTTA TGCTCTCTAG TTTACGGAAG TGGTTAAAAA 
GATGCTGGAG AATCCTGAAA CATTGGCGAC AGCGGTGCCG GGGCGGCCCA AGGTGCAAAT 
CAAACCACAA CACGCCAGAC CCAACATGAT GGACGACGAA GAATCGGGAT GCTGTT 

 

Protein sequence

MAAPPPQTFP YDYLFKVLII GDASVGKSSM LLRFTDDSFD EHIQSTIGVD FKVKHLEVEG 
KRVKLTIWDT AGQERFRTLT SSYYRGAHGV VLVYDVTRTD SFENLQQWLK EVQMYSPGNG 
ESVVKLLVGN KCDLERQVPF EEADAWARSQ GMLFLEASAK TRLGIRQVFT EVVKKMLENP 
ETLATAVPGR PKVQIKPQHA RPNMMDDEES GCC