Gene PHATRDRAFT_51797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_51797 
SymbolFru3 
ID7200210 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp381548 
End bp382763 
Gene Length1216 bp 
Protein Length386 aa 
Translation table 
GC content54% 
IMG OID 
Productfrustulin 3 
Protein accessionXP_002179415 
Protein GI219117241 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000138688 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTA CGTTTCTTTC TCTCGTCTTT GCTCTCGCTT CTGCTGCTTC TTGGGAAGCA 
CAACAGCATG TTGGAGTGTC TGATCAAGGA AGTGAATCCT CTACGGAGCT GCTTAGGGGA
AGTTCGCGTC GATTGCAACT ACCTGTGGTC GCACTTGTTG GAAACAACGG TAATCCAGCT
TCTGCATTTC CATTGAAGGT CTGTCAAGGT GACTGCGACT CAAACAGTGA CTGCGAAGGA
GCTCTCGAGT GCTTCTTCAG AGATGGAGGT GAGGCCGTTC CCGGATGCAG TGGTGGTGAG
AGTGTGTCCA GTCGTACCGA CTTTTGCTAC GATCCGAATC CCAATCCTGC TCCTGTGGCA
ATGCCAGTTC CTGCATGCCA GTGGTACAGC CCACTACCGG AGGACCCAGC GTGACACTTA
TTGGAAACAA CGGTAGTCCA GCGTCTGCAT TTCCATTGAA GGTCTGCCAA GGTGACTGCG
ACTCAAACAG TGACTGTGAA GGAGCTCTCG AGTGCTTCTT CAGAGATGGA GGTGAGGCCG
TTCCCGGATG CAGTGGTGGT GAGAGTGTGT CCAGTCGTAC CGACTTTTGC TACGATCCGA
ATCCCAATCC TGCTCCTGTG GCAATGCATC TGCCGTGGCA ATGCCAGTTC CTGGTACAGC
CCACTACCGG AGGACCCAGC GTGACACTTA TTGGAAACAA CGGTAGTCCA GCGTCTGCAT
TTCCATTGAA GGTCTGCCAA GGTGACTGCG ACTCAAACAG TGACTGTGAA GGAGCTCTCG
AGTGCTTCTT CAGGGATGGA GGTGAGGCCG TTCCCGGATG CAGTGGTGGT GAGAGTGTGT
CCAGTCGTAC CGACTTTTGC TACGATCCGA ATCCCAATCC TGCTCCTGTG GCAATGCCAC
CTCGTGGCAA TGCCGGTTCC TGCTCCAGTG GTACAGCCCA CTACCGGAGG ACCCAGCGTG
ACACTTATTG GAAACAACGG TAGTCCAGCG TCTGCATTTC CATTGAAGGT CTGCCAAGGT
GACTGCGACT CAAACAGTGA CTGTGAAGGA GCTCTCGAGT GCTTCTTCAG GGATGGAGGT
GAGGCCGTTC CCGGATGCAG TGGTGGTGAG AGTGTGTCCA GTCGTACCGA CTTTTGCTAC
GATCCGAATC CCAATCCTGC TCCTGTGGCA ATGCCAATTC CTGCTCCTGT GGCAATGCCA
GTTCCTGCTC CAGTGG
 
Protein sequence
MKLTFLSLVF ALASAASWEA QQHVGVSDQG SESSTELLRG SSRRLQLPVV ALVGNNGNPA 
SAFPLKVCQG DCDSNSDCEG ALECFFRDGG EAVPGCSGGE SVSSRTDFCY DPNPNPAPVA
MPPTTGGPSV TLIGNNGSPA SAFPLKVCQG DCDSNSDCEG ALECFFRDGG EAVPGCSGGE
SVSSRTDFCY DPNPNPAPVA MHLPWQCQFL VQPTTGGPSV TLIGNNGSPA SAFPLKVCQG
DCDSNSDCEG ALECFFRDGG EAVPGCSGGE SVSSRTDFCY DPNPNPAPVA MPPRGNAGPS
VTLIGNNGSP ASAFPLKVCQ GDCDSNSDCE GALECFFRDG GEAVPGCSGG ESVSSRTDFC
YDPNPNPAPV AMPIPAPVAM PVPAPV