Gene PHATRDRAFT_45333 details

Gene Information

• Locus tag: PHATRDRAFT_45333
• Symbol: 6PGDH
• ID: 7200028
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 869375
• End bp: 871526
• Gene Length: 2152 bp
• Protein Length: 519 aa
• GC content: 51%
• Product: 6-phosphogluconate dehydrogenase
• Protein accession: XP_002179525
• Protein GI: 219117461

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0580309
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATAAAACGG CCATCGCAAC TGCTGTTCAC GAGAACTGTT GCAATCGCGA AGCAATCGCA 
AAAGGTGCGT ACCATGTCTC CACACACCGG AACAGTACAG GATGATACTG ACTGGGTTGA 
TGGTTGGTTC TAGAGACGAG AATGTTGGTT TGATTCTTTG CGATTTGGAA TTTACGCAAA 
GGACCCGAAC CACAGGATCT TCCAAGAATG ACTTTCATCT TCCACGCTCT CTGACTACGT 
TGGCGGATGT CGTCCCGGAT CGGCTTTGGC GACGTACCTT AGCCGACAAT ACAGTACACC 
GTGTAGCATA CTCATGTTCC TCACAATCCT ACTGTTTGCC GCTTTCTGCA CGACAACTTT 
AGAATCTATT CAAACACTTT CCACCAACGA GATAAACAGG ATGAGCTGCG ATATTGGTCT 
TTACGGTCTT GCTGTCATGG GACAGAATTT TGCGCTCAAT ATGGTACGTG TAGGGAGCAT 
TCGAGTTGAA TCAATCACCG ACGCACTGGT GGACTCCGTA CTGCGACCGA CCAAACCATG 
TCTCACGGAT TTTGCCTTGC TGTGTCGTTT TCTCTGTAGG CGTCGCACGG GTTCACCGTT 
GCCGTTTGCA ACCGCTCGCC CTCCAAAGTC GATACGACGG TCCAACGCGC CAAGGACGAA 
GGCGATTTGC CCTTGATCGG TACCAAATCT CCCGAAGAAT TTATTTCCAA ACTCAGCAAG 
CCTCGGAAAG TCGTCATTCT CGTCCAAGCC GGAAAACCTG TCGATTTGAC CATCGAAGCG 
ATCAGCGAAT TCATGGAAGA AGGGGATGTC ATTATTGACG GAGGCAACGA ATGGTTCCCG 
AATCAGATTC GTCGTCACGA AGAATTGGAA AAGAAGGGTA TCATGTTCAT CGGCATGGGA 
ATTTCTGGTG GCGAAGAAGG AGCCCGCAAC GGACCTTCTC TCATGCCTGG CGGTCCCCGA 
AAGGCGTACG ACTTGATTGA ACCCATCATC ATGAAGTGTG CCGCCAAGGC TGGGGATCCG 
GAAGAACCCT GCACGGGTTA TTGCGGACCA ATCGGAGCGG GCAATTACGT CAAAATGGTG 
CACAACGGTA TCGAATACGG CGACATGCAG TTGATTGGAG AGGTCTACGA TATTCTAAAG 
GTAGGCTATT CAACGGAGCG GAGCCTGTGC ACCTAAACCT TTGGAGCTTG TTCTCACCTA 
TCCTGTTGCA GAATATTGTC GGTATGGGCA ACGATGAAAT GGCCACACTC TTTGAAGACT 
GGAACTCTGG TGATCTCGAG TCGTACCTCA TTGAAATCAC GGCCAAGATT TTGGCTCGCA 
AGGACGATTT GACCGACGAC GGATACGTGG TGGACAAGAT TCTTGACAAG ACAGGAATGA 
AAGGTACTGG CCGTTGGACG GTACAAGAAG CTGCCGAACA GAGTGTTGCA GCCCCTCTCA 
TTGCAGCTTC CCTCGATAGT CGCTACATTT CCGGCCGCAA GGAAGAACGT GTCGCTGCCA 
GCAAAGTCCT CCAGGGACCA TCCAACGAAA TGCCGCAAGT CGACAAGGAT CAAATCTTGT 
CGGATCTGCA GCAAGCGTTG TACTGCGCCA AGGTAACTTC GTATGCGCAG GGAATGGGAA 
TCATCCAGGC CGCGTCCGAC AAGAACGAGT GGGACGTCGA CCTCTCCCTC TGTGCCAAAA 
TGTGGCGTGG AGGCTGCATC ATTCGCGCGA GCTTGTTGAG CAAGATCACG GCCGCCTTTG 
AAAAGAACAA GGACTTGCAG AATTTGTTGG TGGACGAAAC GTTTGCTGAA GAAATCAACG 
CAAGGCAGAT GGCTTGGCGC CGCGTGGTTT CTTTGGGCGT CGCTAGCGGT ATCGCTACCC 
CGGCCTTGTC CGCTGCTCTT TCCTACTTTG ACCAGTACCG TCGTGATCGC TTGCCGGCCA 
ACCTGATTCA AGCGCAGCGC GATTTCTTTG GCGGACACAC TTACAATCGT GTCGATCGTG 
ATGGCACTTT TCATTGCTTG TGGGACGAAA CGCACAAGGA TATTGGTGAT TTGACGGGCC 
GCACCGCGGG TGAGCTCTAG ACGCCACGGA TCCCGAGTCG CGTTAACGTA TATCAAATCT 
AAGTATTGGT AAATCACAAA CTTCGTCAGC AATAGCGAGT CATTTTAATA TC 

 

Protein sequence

MFLTILLFAA FCTTTLESIQ TLSTNEINRM SCDIGLYGLA VMGQNFALNM ASHGFTVAVC 
NRSPSKVDTT VQRAKDEGDL PLIGTKSPEE FISKLSKPRK VVILVQAGKP VDLTIEAISE 
FMEEGDVIID GGNEWFPNQI RRHEELEKKG IMFIGMGISG GEEGARNGPS LMPGGPRKAY 
DLIEPIIMKC AAKAGDPEEP CTGYCGPIGA GNYVKMVHNG IEYGDMQLIG EVYDILKNIV 
GMGNDEMATL FEDWNSGDLE SYLIEITAKI LARKDDLTDD GYVVDKILDK TGMKGTGRWT 
VQEAAEQSVA APLIAASLDS RYISGRKEER VAASKVLQGP SNEMPQVDKD QILSDLQQAL 
YCAKVTSYAQ GMGIIQAASD KNEWDVDLSL CAKMWRGGCI IRASLLSKIT AAFEKNKDLQ 
NLLVDETFAE EINARQMAWR RVVSLGVASG IATPALSAAL SYFDQYRRDR LPANLIQAQR 
DFFGGHTYNR VDRDGTFHCL WDETHKDIGD LTGRTAGEL