Gene PHATRDRAFT_45306 details

Gene Information

• Locus tag: PHATRDRAFT_45306
• ID: 7199955
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 790071
• End bp: 792272
• Gene Length: 2202 bp
• Protein Length: 708 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002179292
• Protein GI: 219116995

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATCATCACTG TAGATTGTTA ACTGGTTGTC CCCCGATGAA GCAGAGTCCC TACGGAGAGC 
TTCGTACCTT GGTCAATGGC GAGTAACGGG AGCAAGCGGG TGCGACCGTG GGACAAGATC 
CGGGCACAGC CCTTGTCCGA CAAGGCAACC AAGGTCGGAC GCGATAGCCA ATCCCTCGAA 
GATGTTCCAC CAGTGGAAGT TCCTCGCATT GCGATTGATG GAGTGGAATT TCTAAGTGAT 
CGCTTTTATT TGAACAAAAC AATCTACGAC GACGGGATTG CGACATCGGC GTCGCCTGGT 
GGAGTGGGAC TCTACGCGAC GGCGACGAGT TGTACGAATG CGTGCCGGTG TGGAGCCCGA 
TGCCCTCCGC CCTTGTTCGA TCGCTCGCGA CTCGTAGCGC AACTGAATTT GAAAGCCGCA 
ATATTGGTAT CGTATACTGT ACAACCATCT TGGCTCGCCA AAGAGTTTCC TACACTACTC 
GGTCCCCACG CCAACGTCCC CACGTTAGTT CTGCACGGAA AAAAGGGATT GATTGCGGAT 
CCGATTCACG GTGGAGCCAA AAAGTATAAG ATACCAACTA AAGACGAACA AGACGACAGT 
TCGTTTACTA GTCAGGATGA AGAAGAGAGC CCTCGGGATG AGGCTGTTCA GAACTGCCCG 
GCTCCGCCAC CGGTTGCGAA AGCCACCTTT TCATCAACTC GCAATGCGGC AGAAAAGTCG 
TACTCGGAAC GCGCATTCTG GACACAAGTA CAGAATGCAT TCATTCCTTC ACAACACATT 
CCTCGGTCAC GTACAGCGTG GTTGGCGGAA GATGGTTGCT CATTGAATCC GTCTTTAATT 
GAACACCGAG TATATAGACG AGGTGTACAC CATCCCAAGT TCATGATTTT GTTGGAGAGA 
TCCGGGGATG TTGTGGTGGT CGTGTCGACT TCGAATTTAA CGGAACCACG TGCCACAGAT 
GCTTCTTGGT TACAGCGCTT TCCCGCTGCT CGATCATCAA GAGAAAGGAA ACTAAAGGAG 
GAGGAGGACG ATTTCGGAAT AGTCCTGACC AACATGCTCG AGGCGCAGAC TCTGTCTTGT 
AGAAAAGGTC ACGTCACGCC TATGGGGTTT TGTCGTCAAG AACTTGGCTG GAATTCTTTA 
CGCGATCTGA CGAAACACTT TGACTTTTCC AAAGCGCAAG TTCACCTGGT GGCCACCATT 
CCTGGGGATC GACTGAGTAA GACTGCGTCA CCATCTGAAC TCTTTGGACG ACAGAGGGTT 
TCCGCGGTGA TGAAAAGACT CTCGCAAGGA CCCACTCCCA GGCTCCCGCC CATCCTTCGA 
TCAGAGGACG ATCGACTCAT TGTGCAGCCG ACAAGCTTAG GAAGCGAATG GACAAGGGCG 
AATATGACGG AGGTGGTTCG CAGCTATCTT GGGCATGAAG ATCGCGATGT ATCAAAAGTA 
AGAGATGCCC AAGTCTTTCC ACGACTCGAT ATATTATGGC CGACCGAAAG GTTTATGAAG 
GCATATCGGA CCGGCTTCGC TGGTCGGGGC TCGCCCGCCT CTGTTGTGTG CATCGGCGAC 
GCGTTCGACA CGAAGGAGCT CGTATTGTTC AAAGAAAACG AAGGATACTT GTTCTTGTCT 
TCTGACACGT TCAGCAAAAT TGACTTGTCG TGCCTTTCTC GAATGGCTCA GTATGAAGTG 
AGTGTCCCTT TGCAGAGATC ATGCTTACCG CCACACATCA AGAGCATCTG TAGATTGTTT 
CAAGGCAATG ATTATCGTCT GCGACAAGAT TATGGTCTCC CGAAGAGCGA GGAGATTTTT 
TCTTATTTCC TCTTAACCAG TGCCTGTCTA TCAAGAGGCG CCCAGGGGGA AACGTTAACT 
CAATTAGGTA GCCGTGAGAC AGTTGTCTCG TACGCCAATT TTGAACTCGG CGTATTGTTC 
ACTAGCCGGC TGCAAGGCAG GGCCTCGGAT CGTGTATACG GTTGGAAACC AGCACAGTGC 
ATGTGCAGAA ATAGGCCGCG CACTTCTTTG ATTCATCTGC CAGTTCCCTT TTCCTTGCGC 
CCGGCGCGTT ACCAGTCCGA CCGAGACGAT GTTGAATTCT GCGAAACACC TTACTTTCAT 
GAAATTGCAC TAGGGACTGC TTGTGTCGGG AATATGAAAC TTACTCCATA CGGCTCTGCT 
ATTGCCAATC AACAGGAAAG TAAACGAATA GACATTCCTT AA 

 

Protein sequence

MASNGSKRVR PWDKIRAQPL SDKATKVGRD SQSLEDVPPV EVPRIAIDGV EFLSDRFYLN 
KTIYDDGIAT SASPGGVGLY ATATSCTNAC RCGARCPPPL FDRSRLVAQL NLKAAILVSY 
TVQPSWLAKE FPTLLGPHAN VPTLVLHGKK GLIADPIHGG AKKYKIPTKD EQDDSSFTSQ 
DEEESPRDEA VQNCPAPPPV AKATFSSTRN AAEKSYSERA FWTQVQNAFI PSQHIPRSRT 
AWLAEDGCSL NPSLIEHRVY RRGVHHPKFM ILLERSGDVV VVVSTSNLTE PRATDASWLQ 
RFPAARSSRE RKLKEEEDDF GIVLTNMLEA QTLSCRKGHV TPMGFCRQEL GWNSLRDLTK 
HFDFSKAQVH LVATIPGDRL SKTASPSELF GRQRVSAVMK RLSQGPTPRL PPILRSEDDR 
LIVQPTSLGS EWTRANMTEV VRSYLGHEDR DVSKVRDAQV FPRLDILWPT ERFMKAYRTG 
FAGRGSPASV VCIGDAFDTK ELVLFKENEG YLFLSSDTFS KIDLSCLSRM AQYEVSVPLQ 
RSCLPPHIKS ICRLFQGNDY RLRQDYGLPK SEEIFSYFLL TSACLSRGAQ GETLTQLGSR 
ETVVSYANFE LGVLFTSRLQ GRASDRVYGW KPAQCMCRNR PRTSLIHLPV PFSLRPARYQ 
SDRDDVEFCE TPYFHEIALG TACVGNMKLT PYGSAIANQQ ESKRIDIP