| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45284 |
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| Symbol | AP4mu |
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| ID | 7199938 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 733928 |
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| End bp | 735629 |
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| Gene Length | 1702 bp |
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| Protein Length | 470 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179278 |
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| Protein GI | 219116967 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000814146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAGCA ATTTTTTCGT CTTGTCACCG CGGGGCGACA CGATTCTCGC CAAACAGTAT
CGGGTCGACA ACCTCAAACA GAGCGCACAC GAACGATCGC ACGTGGAAGC ACTCTTTCGA
AAAATCAAAT TCTGGGACGA CTTCGCGACG AGCGAAGCCG AAGAAGCGCA AGCGGAGAAA
GCTCGGCAGG ATAACGGCAA GTCTAAACAT CAACAACAAC AATTTGAGAA CAATGATCAG
CAAAAGAGAA TGGGCGACGC CCCGCCGGTA TTTCTCATGC CCGATGGATT GACATACTTT
CACGTCAAGC GTAATGGTCT GATCTTTGGA GCGTCGACCG CGAGGAACGT TAGTCCAAAT
ACGGTAGTCG AGGTCAGTAC ATGTTCGTCT GGTCTTTGGC GTTGTCGGAA GCATTCTTCG
GAATAGACGG AAATGTAGAC GAGTATTCTG TAATTGCATG GACTAACATA ACCTTTGTTG
CTTACTTGTT CCGCTTTCTC GGTCGCCACT ACCAGTTACT ATCAACGATT GCTCGAATAT
TCAAGGACTA CTGTGGACTC TTGTCGGAAG AAGCCTTGCG CAAGAATTTT ATTTTATGCT
ACGAGCTCCT CGACGAAATG ATTGACTTTG GCTACCCCCA GGTCACGCGG ACGGAAAATC
TCAAAAGTTT TGTTTATAAC GAACCCATTG TGGTGGACCA CGTCGCGAAC ACGGGCACCA
TGATCAACCC CAAGACAGCT TCCGCCAATG CCGTACACAA ACCCGTTATT TCGTCGGTCC
ACGAAAACGG ACGCAAGTCG GGCCTCAACA ACAACCAAAA GAACGAAATC TTTGTCGATA
TTCTCGAGCG TCTTAATGTA CTCTTCTCCA ACAACGGCTA CGTGCTCAAC AGCACAATCG
ACGGCTGCAT TCAGATGAAA TCGTATCTGG CAGGGAATCC AGAACTACGG GTTGCGCTGA
ACGAAGACTT GTCCATTGGA AAAGATTCCC GGTACAATGG TGTTGCGGTT GACGACATGA
ATTTCAACGA CTGTGTTAAT CTTTCCGAGT TTGATTCCTC GCGAACAATA TCATTCATCC
CGCCCGATGG CGAATTTATC GTGCTCAATT ACCGCATTAC CGGAGAATTC AATACTCCAT
TTCGTATTTT TCCGTCGATT GAAGAAACCG AACCCAACAA AATTGAGATT GTTGTTCTCA
TTCGCGCCGA AATGCCGAAC AATCATTTTG GAGCAAACGT GTCGGTCGAA ATTCCCGTCC
CCCACTGTAC TACGTCCGCC TCATGTAGTC TTGTTTCGGC ACCGGGCACC GGACATGCGC
ACGCCGAGCT AGTGGCCACT GAAGGCAAGA TTGTGTGGAC CATGAAGAAG TTTCCTGGCG
GCGGAGAACA AACGATGCGG GCCAAAGTGT CGCTCAGCAA GCCCTGTACC ACGGCGATCC
GGAGAGAAAT CGGACCTATC AATATGTGCT TTGAGATTCC CATGTACAAC GTTTCTAATT
TGCAAGTGCG CTATTTGCGA GTAGCAGAAA ACATGGTCGG CTACACACCG TACCGTTGGG
TTCGCTACGT AACGCAGTCC AGTTCCTACG TTTGCCGAGT GTAATACGCT CGCAAAGCGT
CAGGTGGGGT TAGTCTGGGA TCGAGAAAGA GCAGTAACTA GTATCGAAAC ACGACTAAGC
TAGATTCCGA ATTACACTCT TG
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| Protein sequence | MISNFFVLSP RGDTILAKQY RVDNLKQSAH ERSHVEALFR KIKFWDDFAT SEAEEAQAEK
ARQDNGKMGD APPVFLMPDG LTYFHVKRNG LIFGASTARN VSPNTVVELL STIARIFKDY
CGLLSEEALR KNFILCYELL DEMIDFGYPQ VTRTENLKSF VYNEPIVVDH VANTGTMINP
KTASANAVHK PVISSVHENG RKSGLNNNQK NEIFVDILER LNVLFSNNGY VLNSTIDGCI
QMKSYLAGNP ELRVALNEDL SIGKDSRYNG VAVDDMNFND CVNLSEFDSS RTISFIPPDG
EFIVLNYRIT GEFNTPFRIF PSIEETEPNK IEIVVLIRAE MPNNHFGANV SVEIPVPHCT
TSASCSLVSA PGTGHAHAEL VATEGKIVWT MKKFPGGGEQ TMRAKVSLSK PCTTAIRREI
GPINMCFEIP MYNVSNLQVR YLRVAENMVG YTPYRWVRYV TQSSSYVCRV
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