| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45250 |
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| Symbol | |
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| ID | 7200120 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 608518 |
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| End bp | 610821 |
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| Gene Length | 2304 bp |
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| Protein Length | 743 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179468 |
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| Protein GI | 219117347 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.325781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGAAAAAGAA CCATCAAAGA ACAAGCTATC TGTAAATGCG CGTACCATGA AGAGACTGCG
GGGGAAGAGA ATAACTTTAC TGCTTGCCAG TGTGATTCCT TTGCTTGCGG TTGACGATGT
TCCAATGTGG CAGTCCACGA GGGACTCCGA TGAGGAACAT CCTGCTGATC AGGAGAAGGA
ACTGTCTTGT AGGGAACAAA CCCAAATCGA CCGTGGAACA AAGCAATTCC GCGAACCGTT
GCACAGACCT AACGGCGACC GGGACTCTGC ACTGCTGCGG CAGTCACTAA ATCCGGATAT
TTTATTTGAA GGAAGCGAAT TCGGTCAACA CTACAACATT GTAGTGCCGT TTCGGATGGG
ATATCCCCAT AAACTTGTAG GATCATACGT TGAAAATCGT TACAGGCCAC CAGAAAACGA
TACGTCATTG ACCTCTATTA GCACCAGATT GCGAATGGAC GTGGTCCGCG ATAAATTTGT
GTCAAAAGAC GAAAAAAGCG CGGCAGAAAT TGGTGTTGTA GAAAGGAGTA GAGAGACAAT
AAAGAATGAG AAAGTATCCG CATATATCGA TGACTCGCGG GCTGGCGAAG ATCTCCCAGG
ACCAGAAACG ATGCATGCCT CTTCGGGTGA CTCCAAAGGT GATAAATTTT CTGAAGAGGA
CGGACTGAAA CGTGTCTTGG TAGACTATGC CAGCAAATCT GCTGGTGCTT TAATTTTGGA
GAAATCGTCG AGTTGGAACG GGATTTCCAA CGTCCTGAAC GGTGACAAGG ACAAGTACGC
AATTATTCCC TGTGAAGAGC CCCAAAAGTC CGTCGTCATT GGACTCTCCG AAGACATTCT
TGTGAAACAA ATAGTACTTT CCTATTATGA ACGATACAGT TCGCATATTG GAACCTTTCA
AGTGATGGGT TCGCCCCAGA CAATGGGTAA TTGGGTTGAT TTGGGTACAT ACACATCACC
ACGAGGGAAT GGCAAACACG CATTTGATTT ACACGAGCCG TCTTGGGCAC GGTATTTGAA
GTTTCGATTT GTATCGCATT ACGGAGATGA GCATTACTGC ACCGTGAGTC AGATCAGCGT
CCATGGGAGT ACCATGTTGC AAGGTTTTCA CGAGCAATGG GCCGAAACGG TTGAAGAGCA
GCCAAACGAC AAAAACGAGA GGGACGTAGA CGTATCAGGG TCGAAAATAG ATCCTACGTT
TTCGGCTACG GATCAAGAAA ATGGCAATGA CGGCAGCGTC CAAGGGACTG TATCCACTAT
TGGACAATGC TACACCAGAT TGGATGCTGT ATGTCAGATG GATTACAGTT TTGAACGGAG
TGCATTTTTG TTCGCATCCG GTAGGAGCTC TACACCTGAC TTTGATTTAT TGAGTGCGCT
TTCATCCGCG TCCTTTTGTC AACTTGGCAG GCAATCGGCA AGAACAAATT ATTCTCATTT
TGTTGAGCTA GGCCGTCGTG CGCTTACCAT CTCTCCGAAA CGTGGTCGTA GTACCAAGAG
TAAATTTGTT GCCGATTTAT CCGATCAAGC TTTGTTTCAC TCACTTACGG AATCTGTTGT
TGTTAAACAC ATTCAGAGTC TCATCTCTCG AACGACAGGG ATAGACATAC ATGTGGAACG
TTTTGGTGTA TTGGCAACAG TTGATAGGAC ACCCGACAGA ATTTCTGTCG ACGATTCGAA
TCCCCCTGCA ACTGTTTCAT CAGCTTCTGG GGTGATCGCC GGCACCAAGC TGGTTACGTC
TGAAGTCGAA GCCATTGAGC GTATCACGGA TGAGATTGAA TCTCAGCCGT TATTGCAAGC
CATTCAACAG ATGGAAGAAA AGATTCCTTT CGATACCGCG TTTCATGCAT CTGGATTTTC
ATGGAGCAAG ATATTGGAAC AGCTTCCTAG CGCAGCTTGT CTGGAAAAAC TCGATTTCGC
TGATTTTAGA TCCGGCAAAA AATTGAACTT GCGCAATGGG GGGCCGGGGT CGCACGGCAA
CGCCCAAGGC GGAGGTGGTA TGGAGCCAAT CTTTAAAAAG TTCACTGACG AGATAAAAGC
GCTGCAGACT AGTGTTTCGA TTCATGATCA ATTTTCCAAG GCACTGGCCT CTTGTTACCA
ACAAGTATTC CTGGAATTAT TGGTGGAAAT GGATGTCAAA CGCAGTGACA TTGATAACCG
GATTTTCCAG TTGGAGAGGA AAATGCAGAG TGGTTTATTT TTTTTCTCTG CAGTATCTCA
ATGGATGTCT CCAATTATTG GTGGTGTTGT AACGATTTCA AAGCTACCGA TATCGCTTTC
TTTCCAAAAC CGCACAATCA TTGA
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| Protein sequence | MKRLRGKRIT LLLASVIPLL AVDDVPMWQS TRDSDEEHPA DQEKELSCRE QTQIDRGTKQ
FREPLHRPNG DRDSALLRQS LNPDILFEGS EFGQHYNIVV PFRMGYPHKL VGSYVENRYR
PPENDTSLTS ISTRLRMDVV RDKFVSKDEK SAAEIGVVER SRETIKNEKV SAYIDDSRAG
EDLPGPETMH ASSGDSKGDK FSEEDGLKRV LVDYASKSAG ALILEKSSSW NGISNVLNGD
KDKYAIIPCE EPQKSVVIGL SEDILVKQIV LSYYERYSSH IGTFQVMGSP QTMGNWVDLG
TYTSPRGNGK HAFDLHEPSW ARYLKFRFVS HYGDEHYCTV SQISVHGSTM LQGFHEQWAE
TVEEQPNDKN ERDVDVSGSK IDPTFSATDQ ENGNDGSVQG TVSTIGQCYT RLDAVCQMDY
SFERSAFLFA SGRSSTPDFD LLSALSSASF CQLGRQSART NYSHFVELGR RALTISPKRG
RSTKSKFVAD LSDQALFHSL TESVVVKHIQ SLISRTTGID IHVERFGVLA TVDRTPDRIS
VDDSNPPATV SSASGVIAGT KLVTSEVEAI ERITDEIESQ PLLQAIQQME EKIPFDTAFH
ASGFSWSKIL EQLPSAACLE KLDFADFRSG KKLNLRNGGP GSHGNAQGGG GMEPIFKKFT
DEIKALQTSV SIHDQFSKAL ASCYQQVFLE LLVEMDVKRI GEENAEWFIF FLCSISMDVS
NYWWCCNDFK ATDIAFFPKP HNH
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