| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45245 |
|---|
| Symbol | |
|---|
| ID | 7200261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 591093 |
|---|
| End bp | 592727 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179245 |
|---|
| Protein GI | 219116901 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.947975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAGC AACCACTACC TTCGCCCATG TTTCATTTGA GTCCAGTTAA GCCGAAGGCA
GCAATTTTGT CACTCCCTCC AGATTCGCCC GGAGTTAGCG TGATTCAGGA CGGTAACTCC
GATGGTAACC GCGTTTTTTC TGTCGTGATT CCAGATGGAG TGAGAGGTGG CGAGTACTTT
CGCGTAACCA TGGCAGGTGA GACGATGAAA GTTAAATGTC CGATGATGGT AGATCCTGGC
GAGCGCGTTC GAGTTACGTT GCCACCCAAA TCACCCCTAT CTCCCACCGA TATAAGTGTG
ATTGCGGCCC GTCATCCTGG GCCTTACTGG ACCCACATTC CTTACCGTGC CAAACCGGGA
GAGCGCTTTC AGCTGAGTGT ATTTGGAGCC GTTGTAAATG TGAAAGTACC ACCAGGAGGA
CATGAGGGCA TGAGAATCTG GTTTATGCTA GGAGAGAAGA AAGGCGAAGA AGATATGGCC
GATGGCCACG CTCCATCTTT GGGCCAAATT GATGTGCCTC CTCTCTGCGA CAAAAGCGAT
TCTTCAAACG GTTTGGAAAG AAGAGATACT ACAACGAACA GCGATACAAT GAGAAAGGAA
GACACCATTA GGCCTTCTGA AAGCGAACTA TCCCACACTG AAGAAGATGG CATTTCCGAC
GACGAAACGG AAGAACCATT CCGTCCTTCC TTGCGCCCAT CTACGCTGCG AGGTATGTCC
TTTGACGACG ACGAAAAGAC TCCTTCTACC TACTGTTCCG ATCCCGATGC CCATCCGAAC
GGTGAAGAAA AAAACGTGTT CCACGATGCA GTGGAGGAAA TCGGCAATCG TGTCCGCCGT
GGTGGTCGCC GGGTCGCACT CCCAGAACCG CCACTCTACG AAGCCGAAGT TCTTTGTTTG
CGGTACGTGG GCGGGGAAGG AGAACATCGT GAGTATGGTT GGGAAAAACC GGACTGGACA
ACCAAAGACT TACGGCCAAC TGGTAGGAAT GTCAAAGACG GCTCGACGCT GGCCAAACCT
GTAACGTTGA TTGCCAATGT TGTCGGTACG GAGCAGCATC TGTCGTGGGA GAGGCCCGCG
TGGACGAAAC AGACTCTCAA GGTGACCGAG AAAGGCCAAA GGGCTAAAAA TGGCGAAACT
CTCGCGGCTC CGGTGACGAA CATTGCCCAT GTTGCTGCGG AAACGGCTGA CTACCAATTT
CAAAAACCAG AATGGACCAG AAACGCCGGA TTGCGAAGCA CAGGAAAGTT CGAAAGGCTG
CAAGAAGGGA AGGATATTGT TCGTCCAATT GGAGGTATCA AGCATATCGA CAATGTGAAC
AAAGTTGATG TGGAGCTCCT TTCCTCTACA TCCAGTCTGG TAGAGCTCCC ACGTCATGAA
TCAGTTACGA CTTCCTCGCA TGTCCCGGAA ATCGTAGTTC CTTTGGACCC AGCTGATGCG
GACAAAAAAT TGGAGTTGGA GGACTCTATC TCAGAGGTTT CTCAAGTCGA TAAGGACACC
GTCGAACCGG ACGAAAGTGT GGAAGAATAC GACGAAGATA TCTTTTCCGA GGAAGAATAC
GAAGAATATG TTGTTGTGAG AGAAGAAGAC GTGGAAGAAG ATGTCGCATT GGCTGAGATT
CGAATCGCGA CGTAA
|
|---|
| Protein sequence | MQEQPLPSPM FHLSPVKPKA AILSLPPDSP GVSVIQDGNS DGNRVFSVVI PDGVRGGEYF
RVTMAGETMK VKCPMMVDPG ERVRVTLPPK SPLSPTDISV IAARHPGPYW THIPYRAKPG
ERFQLSVFGA VVNVKVPPGG HEGMRIWFML GEKKGEEDMA DGHAPSLGQI DVPPLCDKSD
SSNGLERRDT TTNSDTMRKE DTIRPSESEL SHTEEDGISD DETEEPFRPS LRPSTLRGMS
FDDDEKTPST YCSDPDAHPN GEEKNVFHDA VEEIGNRVRR GGRRVALPEP PLYEAEVLCL
RYVGGEGEHR EYGWEKPDWT TKDLRPTGRN VKDGSTLAKP VTLIANVVGT EQHLSWERPA
WTKQTLKVTE KGQRAKNGET LAAPVTNIAH VAAETADYQF QKPEWTRNAG LRSTGKFERL
QEGKDIVRPI GGIKHIDNVN KVDVELLSST SSLVELPRHE SVTTSSHVPE IVVPLDPADA
DKKLELEDSI SEVSQVDKDT VEPDESVEEY DEDIFSEEEY EEYVVVREED VEEDVALAEI
RIAT
|
|---|
| |