| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45242 |
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| Symbol | |
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| ID | 7200258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 583445 |
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| End bp | 585724 |
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| Gene Length | 2280 bp |
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| Protein Length | 752 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179463 |
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| Protein GI | 219117337 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00924108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACGGA TCGTGCCGCT GAATTGGCCC GAATCGAAAC TAACGCGCAG CTCTGCTTCA
CAAAATGACA CGATCACCTC TGTGCTGCAT TTGACTGTCA GGAACGAAAG CCTCATGAAG
GAACCCTTTC CTATGCCGCG ACTCCAAACC AACCAAAGAC CAGAGCAAAG GCAAGACCAG
CAAAATGTGG ACGATTATAG CGTCGAAAGT CCTAGTTTTC CATGGTTGTC CAGGCTTTTC
CCGAGTAGAA AACCACCAAT GAAGCCTACA ATTCTAGTGC TATCGGCTTT GTCCTTCCTG
TTTGCCACCC TCCAGCTATC CCACTGTAGC TTTATGCATA CTGGCTTGCC AGGCTCCGAA
GTCGCCATGG GATTGTTTTC GACCACTGCC TACGACAAGA ATGGCGCTTC GATCGGATGC
CTCGCCTATA CCGATCAGAT CCAGATGGAT GGCATGTTTC GCGCGGGACG AGCTTTCGGT
ACTATAACCG CACTGTGGAC AGGTACTGCA TTTCTATTGC TTCTTGTCGC TCTCACATTT
TGCCCACCGA GGACCGAGAA ACTCTGGAAC ATTGCACGTG GCTTGTTAAC AACTGCGACG
ATTACGCAAA TGTTCACCTT TTTCGTCATG GGTAGTGAGC AATGCCCAAC CAACGACTGC
TTTCTGTCAG GAGTGGGAGT ACTGGCCGTC TTTAATACCT TTGTTTTGCT TGGAGTCAGT
TCAATGACCT ACCTTGAGGC GATTCCCGTC GAGCCGTGGT TGGTACTGAG TAACGACGAC
TGCGACGTTG CGCACAACGA CACCTCGGTG ACACCTATCG CGCAAGAAGA ATGTGTGCCA
CACGCGAGTT GCAGTACCAC TGGTATATCA AGCAACCCGG CCAATCTGCT TGACACAGTC
TTACCCAATC CTGAGGTCTT GGAAATGAAA GATGTTGATC TCAACGACAA GCACGATGAG
CCATCCGATG CTGATCCTTC CAGCTCGGAC GCTTCCGTAC AGAGTCACGA CCCAGCCGAA
AACGTAGCGC ATGAACGGGA TACATTTATC AGTACAATTG GCACGCACCA TCGGAATAAA
CTTCGGCTCT TGAGCTTCGG GCTCGTTCTC GCGGCATGGT CTATCAGTTT AGTTGGGATA
CAACGTTGTA CCTTTATATT AGTCGGACTC CGAGAAACGG GGAAGTCAAA TTATTCTGGT
TTGGGTCTCT TCAGTCGAGC GGTGTACTAC AACGGCGAAA TACTGGGATG CGTTGCGTAT
CCCGATGAAG TCCGGGGTGA CTTTGATTCG GTCTTTCAAG CCAGCCGAGC TTTCGGTGTC
TTCACGGTGC TTCTTTTGAC AACCGTCACC ATTCTCTTCT GTTTGCAGCT CTTTACTAAC
AAAGCCAAAT CACCAATCTG GCTTGCTGTC CGCGTTTTGC TTACTTGTGC TGTCATTACC
CAGCTACTGG TCTTTCTTGT TTTTAAGTCG GACACTTGTT CGATCAATAA CATGGTAGAA
TGCGTTCCAG GTGGTGCAGG CATTATGGTT GTCCTTAATC TCTTTCTAAT ACTAACTTTG
GCAGTCTACA CGAACAAAAT GGAACCTCCG CGGAATCCTG TATTCCTTTC GTGGCGAAAC
AACAATCACG AAGCGCTTCT TCCTGTGGGC CAGAAGCTAC CGATACGGAG CGAAGAATTG
CGCCAGCTGC CGGACGGGGG AACCGAAACA GAAGAATCAG GCCACATTGG TGATTGTGCC
AACGAAGCTC GCTTTCCCGA CGTTTCCGAA AAACAAAATT ACAGTGCCAA CGCAGGCCCC
TCAAAGCACG AATATAAAGA AGATACCTTA GACGATATTG ATATGGTCAA GGTGCAAGTG
AAATTCACAG CAACAGAGAA GAAAATCGTC AAAGAAGTGA CGCATGCGGA CGGTTCCAAG
ACTATAACTA CAACTGTCGA AGAGCTAGAT ATTGCATGCA ATGATGACAA TGGCAGTAAA
CACAATCAAC GCGCCACCAT AGCGCTGGCT TCGTTTCCTT TGTCCAGCGA AAAGAGCGCT
GTGCAGGAAA GTGCACAACT CTTACCAGAA AATAAATGCA TTCACCATGA AGGTTGTCCA
ACGCATTTTT CAACCAAGAG CAATACGGGC TGGACGTGTG AAAATCACAG TAACCATTCC
TTTCAGCTCA CCCTGGGAAA GAAGACAAGC AAGCATCTTG CGGAGCAAAA GAATGCAGAT
ATGGAAGAGA TTGACAAGTA CATCAACCAA AACTCGTGAG TAGAATTCAT GTTTACTTTT
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| Protein sequence | MQRIVPLNWP ESKLTRSSAS QNDTITSVLH LTVRNESLMK EPFPMPRLQT NQRPEQRQDQ
QNVDDYSVES PSFPWLSRLF PSRKPPMKPT ILVLSALSFL FATLQLSHCS FMHTGLPGSE
VAMGLFSTTA YDKNGASIGC LAYTDQIQMD GMFRAGRAFG TITALWTGTA FLLLLVALTF
CPPRTEKLWN IARGLLTTAT ITQMFTFFVM GSEQCPTNDC FLSGVGVLAV FNTFVLLGVS
SMTYLEAIPV EPWLVLSNDD CDVAHNDTSV TPIAQEECVP HASCSTTGIS SNPANLLDTV
LPNPEVLEMK DVDLNDKHDE PSDADPSSSD ASVQSHDPAE NVAHERDTFI STIGTHHRNK
LRLLSFGLVL AAWSISLVGI QRCTFILVGL RETGKSNYSG LGLFSRAVYY NGEILGCVAY
PDEVRGDFDS VFQASRAFGV FTVLLLTTVT ILFCLQLFTN KAKSPIWLAV RVLLTCAVIT
QLLVFLVFKS DTCSINNMVE CVPGGAGIMV VLNLFLILTL AVYTNKMEPP RNPVFLSWRN
NNHEALLPVG QKLPIRSEEL RQLPDGGTET EESGHIGDCA NEARFPDVSE KQNYSANAGP
SKHEYKEDTL DDIDMVKVQV KFTATEKKIV KEVTHADGSK TITTTVEELD IACNDDNGSK
HNQRATIALA SFPLSSEKSA VQESAQLLPE NKCIHHEGCP THFSTKSNTG WTCENHSNHS
FQLTLGKKTS KHLAEQKNAD MEEIDKYINQ NS
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