Gene PHATRDRAFT_45159 details

Gene Information

• Locus tag: PHATRDRAFT_45159
• ID: 7200339
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 352800
• End bp: 354851
• Gene Length: 2052 bp
• Protein Length: 683 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179193
• Protein GI: 219116797

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0183197
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCCG AAACTGAACG CCGAAGCTCT GATTTAGAAA GGGAAGGGCA AAAGATCGAC 
GTTTCGATGC TATCGTACTC GGAGATGACT TTGGTCAGCT CCGGAGAAGT AATGACACGC 
GAGACCAAGG CTGCGATTCG CAAAAAGCTT GGGTATTGCA CGGAATGTCC AGGGCGACCG 
GTACTTGTCT TCGACGTGAA GAGGTCAAAA TTAAACCCCT TGTGGTTTTC AAAGAAGGTC 
AGGAGTATAG ATGGGGAATG CAATGATGGG CATTGCCTGA AATGCCATCC TGATTTTGAT 
CCAAAGAAAC CCTCGGAACG AAGAGCCCTT CGGCGCTATT CGGAAAAGAG TTGCGGGACA 
AACTCAACTG TTTCCATGGG CTCGTCACGC TCGCTAAGGT CTCAAGAGAG TGATAGTAGT 
TCACCTAATA CTCCTGTGAG AACCACTCCT CGGCCCAAGA CCCGTGCTTT AGCCAGGTCT 
TTGTCAAATG AAACGGACCT TCAAGCCATC AAGCGAATGC CTCGGCTAGA TAGTAAACGT 
ATCATGGAGA ACTCCGACTC CGCCAGTGAT GAACGACATT ATGATCAAAG AGCCAACCGA 
CAACATTCTG ATGGGAGACC CATGCCTCGT CGCTCCAAGT CTGCTAATCT TTCTCCCGAA 
ACCTCGCCCA ACTCCGGTGA CTCAGGCGAA GGTCAGAACA TGACTCTTCG AGGAAACAGC 
GAACACCTTC GCTCGTCCAC GAGCCACCAC GAAGGTCGAG TGACTGTTGA ACTATCTCGC 
AAAGTCGTCG ACACCCTTTA CAATGATGAT ATCAAAGAAG CCTCCGTTCA TTCGTTTTCT 
ACAGTTGAAA GATCGGAAAG CTCCCCACCG GCTAGTCCGT CGGATAACTG GAGTCCCACA 
CCTAGTCCGA GACCTCGCCG GAAAATTAAG CAACAAGATT TGCAGTCTTC TGCCGTTACC 
GAACTTCAGG GACTACTGGT TGATCTTGTC TCCAGCGGCA GCCATCATGT TCTGTCTGAA 
ATTCTTTGTG ATTCAATGAA GTCGAATTCT AACGACTTGG AGATTCAGCT GTTATGCCTT 
CGTACAATAT CTTCAGCGTT CAAGCAGAGC AACGTTGGAA TCTCCAAGCT TGTCTTGGCC 
CGTGCACATA TAGAAATCAT CAATGCGATG CAACACTTTC ATTCATCGAT GGAGATACAA 
CAGAGGGCAT GTGCTGCAAT CTGGGCATTA TCGCGAGACA ATAGCGCAAG GACAGCTTTG 
ATACGTAAGG GTGTCTGCGA CTTGATTCAA AGAGCAATGT CGAGGAACTT TGGTGATAAT 
GTACTTGTAG AAAAGGCCTT AATGGCTCTC CGAGCACTCT CAATCGACGA AGAAGCACGC 
GACATTCTGC ACCGCGTGAG CGTGGTGCAC GACATTGTTC AGGTCATGGA GTGTCACTGT 
ATGAACGCGG ATATCCAAAG GGATGGATGT GCAGTCTTGT CCAACATGGC AGTCGAGTTT 
GAGAAGAAAC AGGCCTCCGT TGTGTCGGTA CACGTTCTGA GAGCGGTGGT TGCCGCTTTG 
AAGACGCACT TAAGTGATCC TGTTGTTGTC GAGAGTGCAT GTTTCGCTCT TAACAACTTC 
TCGTACGAAG AAACAAATCT GAGGGCTCTT CGTCGTTTTA CTGAGATATT CCCTCTTCTA 
GAACGGGCCC AGCAAATCAG CAAGGGTGAC CATGCATTTG CTGTTGTCGA AAAGCTGCAA 
ATTTCTCGCG CTGAAGATGA GTCCTTGGAG GAACAACTGC ATGCGTACTT GCTGCATCTT 
ATTGAACAGA AAGCCGATGT ACCGGAAGTT GTGGAAGAAG TTGTAGAATT CCTCCGTGCT 
AACGAATGGT CTCTGCGCAT GATGGCAGAA ACCCTCAGTG CGCTGCGTCT TCTCGCCACT 
AAGGCAACTT TCCACAAAGA AATTCTTCTT GACCAGTTAT CAATACCTGA TCTCGAAAGA 
ATATTGAGAG TGTTTGAAGA CGATATTCGT ATTCAAACAG AAGCACGCCG ACTTATCGAA 
TGCTTTAAGT AA 

 

Protein sequence

MASETERRSS DLEREGQKID VSMLSYSEMT LVSSGEVMTR ETKAAIRKKL GYCTECPGRP 
VLVFDVKRSK LNPLWFSKKV RSIDGECNDG HCLKCHPDFD PKKPSERRAL RRYSEKSCGT 
NSTVSMGSSR SLRSQESDSS SPNTPVRTTP RPKTRALARS LSNETDLQAI KRMPRLDSKR 
IMENSDSASD ERHYDQRANR QHSDGRPMPR RSKSANLSPE TSPNSGDSGE GQNMTLRGNS 
EHLRSSTSHH EGRVTVELSR KVVDTLYNDD IKEASVHSFS TVERSESSPP ASPSDNWSPT 
PSPRPRRKIK QQDLQSSAVT ELQGLLVDLV SSGSHHVLSE ILCDSMKSNS NDLEIQLLCL 
RTISSAFKQS NVGISKLVLA RAHIEIINAM QHFHSSMEIQ QRACAAIWAL SRDNSARTAL 
IRKGVCDLIQ RAMSRNFGDN VLVEKALMAL RALSIDEEAR DILHRVSVVH DIVQVMECHC 
MNADIQRDGC AVLSNMAVEF EKKQASVVSV HVLRAVVAAL KTHLSDPVVV ESACFALNNF 
SYEETNLRAL RRFTEIFPLL ERAQQISKGD HAFAVVEKLQ ISRAEDESLE EQLHAYLLHL 
IEQKADVPEV VEEVVEFLRA NEWSLRMMAE TLSALRLLAT KATFHKEILL DQLSIPDLER 
ILRVFEDDIR IQTEARRLIE CFK