Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_45145 |
Symbol | NTT2 |
ID | 7200330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 317418 |
End bp | 319312 |
Gene Length | 1895 bp |
Protein Length | 575 aa |
Translation table | |
GC content | 48% |
IMG OID | |
Product | nucleotide transporter 2 |
Protein accession | XP_002179404 |
Protein GI | 219117219 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0739731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CGACGATTCT GGTTGAATGT GATGAATCCA CCGATTCGTT CCTCCGAAAC TCTACGACGA ACTTCATTGG AGAGGTGGCA AACGTTGCAA TCTTTCGAAA TACGGTGATA GGCATTGATA GCTCCTCGGA AACACTTTTT TGCCGGTTTT ATCTGGTTTG CAAGCGGATG AGACCATATC CGACGATTGC CTTGATTTCG GTTTTTCTTT CGGCGGCGAC TCGTATTTCG GCCACTTCCT CTCATCAAGC AAGTGCACTT CCTGTCAAAA AGGGAACGCA TGTCCCGGAC TCTCCGAAGT TGTCAAAGCT ATATATCATG GCCAAAACCA AGAGTGTATC CTCGTCCTTC GACCCCCCTC GGGGAGGCAG TACTGTTGCG CCAACTACAC CGTTGGCAAC CGGCGGTGCG CTCCGCAAAG TGCGACAAGC CGTCTTTCCC ATCTACGGAA ACCAAGAAGT CACCAAATTT CTGCTCATCG GATCCATTAA ATTCTTTATA ATCTTGGCAC TCACGCTCAC GCGTGATACC AAGGACACGT TGATTGTCAC GCAATGTGGT GCCGAAGCGA TTGCCTTTCT CAAAATATAC GGGGTGCTAC CCGCAGCGAC CGCATTTATC GCGCTCTATT CCAAAATGTC CAACGCCATG GGCAAAAAAA TGCTATTTTA TTCCACTTGC ATTCCTTTCT TTACCTTTTT CGGGCTGTTT GATGTTTTCA TTTACCCGAA CGCGGAGCGA CTGCACCCTA GTTTGGAAGC CGTGCAGGCA ATTCTCCCGG GCGGTGCCGC ATCTGGCGGC ATGGCGGTTC TGGCCAAGAT TGCGACACAC TGGACATCCG CCTTATTTTA CGTCATGGCG GAAATATATT CTTCCGTATC GGTGGGGCTA TTGTTTTGGC AGTTTGCGAA CGACGTCGTC AACGTGGATC AGGCCAAGCG CTTTTATCCA TTATTTGCTC AAATGAGTGG CCTCGCTCCA GTTTTAGCGG GCCAGTATGT GGTACGGTTT GCCAGCAAAG CGGTCAACTT TGAGGCATCC ATGCATCGAC TCACGGCGGC CGTAACATTT GCTGGTATTA TGATTTGCAT CTTTTACCAA CTCAGTTCGT CATATGTGGA GCGAACGGAA TCAGCAAAGC CAGCGGCAGA TAACGAGCAG TCTATCAAAC CGAAAAAGAA GAAACCCAAA ATGTCCATGG TTGAATCGGG GAAATTTCTC GCGTCAAGTC AGTACCTGCG TCTAATTGCC ATGCTGGTGC TGGGATACGG CCTCAGTATT AACTTTACCG AAATCATGTG GAAAAGCTTG GTGAAGAAAC AATATCCAGA CCCGCTAGAT TATCAACGAT TTATGGGTAA CTTCTCGTCA GCGGTTGGTT TGAGCACATG CATTGTTATT TTCTTCGGTG TGCACGTGAT CCGTTTGTTG GGGTGGAAAG TCGGAGCGTT GGCTACACCT GGGATCATGG CCATTCTAGC GTTACCCTTT TTTGCTTGCA TTTTGTTGGG TTTGGATAGT CCAGCACGAT TGGAGATCGC CGTAATCTTT GGAACAATTC AGAGTTTGCT GAGCAAAACC TCCAAGTATG CCCTTTTCGA CCCTACCACA CAAATGGCTT ATATTCCTCT GGACGACGAA TCAAAGGTCA AAGGAAAAGC GGCAATTGAT GTTTTGGGAT CGCGGATTGG AAAGAGTGGA GGCTCACTGA TCCAGCAGGG CTTGGTCTTT GTTTTTGGAA ATATCATTAA TGCCGCACCT GTAGTAGGGG TTGTCTACTA CAGTGTCCTT GTTGCGTGGA TGAGCGCAGC TGGCCGACTA AGTGGGCTTT TTCAAGCACA AACAGAAATG GATAAGGCCG ACAAAATGGA GGCAAAGACC AACAAAGAAA AGTAG
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Protein sequence | MRPYPTIALI SVFLSAATRI SATSSHQASA LPVKKGTHVP DSPKLSKLYI MAKTKSVSSS FDPPRGGSTV APTTPLATGG ALRKVRQAVF PIYGNQEVTK FLLIGSIKFF IILALTLTRD TKDTLIVTQC GAEAIAFLKI YGVLPAATAF IALYSKMSNA MGKKMLFYST CIPFFTFFGL FDVFIYPNAE RLHPSLEAVQ AILPGGAASG GMAVLAKIAT HWTSALFYVM AEIYSSVSVG LLFWQFANDV VNVDQAKRFY PLFAQMSGLA PVLAGQYVVR FASKAVNFEA SMHRLTAAVT FAGIMICIFY QLSSSYVERT ESAKPAADNE QSIKPKKKKP KMSMVESGKF LASSQYLRLI AMLVLGYGLS INFTEIMWKS LVKKQYPDPL DYQRFMGNFS SAVGLSTCIV IFFGVHVIRL LGWKVGALAT PGIMAILALP FFACILLGLD SPARLEIAVI FGTIQSLLSK TSKYALFDPT TQMAYIPLDD ESKVKGKAAI DVLGSRIGKS GGSLIQQGLV FVFGNIINAA PVVGVVYYSV LVAWMSAAGR LSGLFQAQTE MDKADKMEAK TNKEK
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