| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45115 |
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| Symbol | |
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| ID | 7200185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 231156 |
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| End bp | 236825 |
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| Gene Length | 5670 bp |
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| Protein Length | 1834 aa |
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| Translation table | |
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| GC content | 53% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179163 |
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| Protein GI | 219116737 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.544677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAAGA GATCGTTGCC ACAGTCCTCC GCCGTCACGG CCAATCAGTG GACGGTGGCG
GCGATCCATC CCGCCAGTGA CGCCGTCTGG CACGAAGAGC AAGCATCCAC CCTCACGCGC
TACTTCTCCG CCGTGGACGT GCTCTGGCAA CAACCGTCAC TACCACACTC ACAGTCACAC
TCACCAATGT TGTGGTTGCA ACAAAAGGTA CACGTGGGGG ACGTCTGTGC CTTTGTCGTC
CCCACGGGTT TGCGGCAAGA TCCCTTCCTC GACCAATCCT GGATGGTGGG ACAAGTCCTA
GTCTTGGCCT CCCGGGCCTC CTTGACGCAT TCCGCTCGCC TCCACGCCCT CGTGCGTTGG
CTCCCGCACG CCAAACAGGT CGAAACCTGG ATGCCACTGC CCGTTTACAA ACGATGGACC
ACCACGTACC GCCCCGCACA ACTACTCCTC GAAACCCTGC AGTGCCAGAC GATCGCTCTC
GCACACTTAC TCCCCGCTAC CGTGCGCATA CGACCCACCC AACACTTTAC CACGCAAACG
GCCTTGCCAC CCGAACCCTT CCCCGATATG CCCTTTTGGC GACTCTACTT TCACGTACCC
AAACGCTGGT ACCGACCCGA CGAACCGCAC CGGAACCACC ATGAACTACC CTCGGAACGG
GTCGGTCCAC AATGGTCACA CCCGCACACG GAACTCACCT TGGCTAGAGC CTGGACGGCC
GCGGTGGCCG AAGGAATACT CCCACCGGAA CTACACCGCC GACTAACCAA CGTTCGTTGT
CCCAACCAAC ACCCCACCCC CGCCTGGCTA GCCACCGTTC ACGACCACCA ACCACCGACC
AACCGTAAAT CGGATGCCCC TTCGACGGAC ACGGTCGAGA CGACTACCGA GACGACGAGC
CGTAAAAAGG CTCGTCCATC GCCATCCCCC ACCGTATCCA CCACCGACCC TGCCCTCGCC
GTCCAACCCG CCTCCAAAAT CGTACACCGC GCGACCCGGG ACGGCGTCAC CCGAGCCTTT
GGTACGGCAC TCCGGATTCC TTTGCAACCG TCCGATACAC ACCGATCCGT ACTCGCCAAC
GCACAAACCT GCATTGTCCG GGTCGGGGAC GCCGTCGTTA TGGCCTGTGA CGATGCCCGC
ACACCCCTCC GTGACGCCGG ACCACGTCCG TGGTATCCAT GGACGCGGCC GTGGAGCGTC
GCGATAGTTC TAGCCGCCGT GGACACGCAC GATGAGTACC AATTTCAAGT CCGCTGGCTC
GCCAACGCCC AGGAACTACC ATCCGGCGTA CTCACCAAGG CATCCCACAG CATCCGCGCC
GATTGGAAAC GTCCGGAACA CGTTCCTTAC CTTTTGGCCG TGACGGACGC CGTCGATACC
GTTCCCGCCG AAGCCGTGCT GGGACGCGTC GCCTGGGTCC CGTGTCCCCC GCCCCGGCCG
CGTTACGTCC TACGTGGCGT CCCCCAAATC CAACGCGTCG CCAAGTACCG ACTCGACCGA
CACCGATTGC GATACATCGA GGTGGGCACG GCCCAGAGTC TCCGGCAAAC CCTAGTCACC
CGTGCCTGGC AACTACCCGA ATCCTTCATC CACCAGGATG CGCAATTGCG CCAGATCTAC
CGTACGCAGC TCGGGTTGTC GGAGGACGCC GACGAGGATC TTTCCGATCC CCAAGACACC
GTACAAGCCG AGACAGACGC AGCGCTGGCG GACCCGGCCA CTAAGGGGCC TCTGGCGTGG
CTTAATCCCG TGACGAACGT GCGCTCCGTG CCCAACCGGC CCCTTCTAGC CCGTACGAAC
AATTTCGAAT TTTTCGAAGT CGTCTCCGTC GCGGTAGTCC CGCGATTTTG TGATCGCAAG
GTGACCGCCA AGAAAACAAC CGAGACGCGC TGGAATGTGA GAATTGGGGA CGTTGTCTGT
TTGGCCGATA GCGATTCCAC TCCGCCTCCT CCTCCTTCCC CCCAAGCGAA CAAAGCGCGG
TGGTATCCCT TCGTGGGTCC GTGGCGGTAC GCTCAAGTGC TGAGCATCTA TCGCGTTCCC
GGAGCCGACG ATTCCAAAAT TCGACTGGAA ATCCGATGGC TGTTCCGAAC AACAGAACTA
CCGCTGCATG TGAGAGCGCG GATTCCGGTG GTGACGGATT CCGCACGGGA AGTAGTCTGG
GAGACTGATT CGGTACAGAG CGACGTGCCC GCTGCCCGGG TCTTGGGACG AGCCAAGGTC
TTTTTGGGCC ATCACGTAGA TGCTTGGATG GGCACCGGAA CGGAAATCGA CTCGGTTCCA
CACGTGGCAG CCCGGTGCTC TTACCTGTAC TTTTCGACGT CGGAACGCTT CCAACCACTC
TTTTGTTCCG GGACGACGAC CATCCAATGG TTTCAGCGAC TCATGGAGCG TGGCTTTTAT
TTCTCCGATA TGGTTCGCAA GAACCAACCG CTCGGATCCG CCATTGAGTT CTGTCTCAAT
ATTTCCGTCT GCGGCGGCGA AAATGGTTGT GGTACGCACG ATCTGTTTGA GGATCTCGTT
GCGAGAAAGG AGGACTCCAT CGACAAAGCG GACCACGAAG CGCTTTTGCA AAGCAGCGAA
CCAAAAGGAG GTCTTCGCCA TTTTGTTTCT GTAAGTATTG TTCCACCGTG GACGTCATTT
TTGCATTCGG ACGTCGTCTG TCGAGAGCGA GATCGAAGGG GACTCGAATG GACCCTCCGA
GTGGGCGATG TGGTAGCGGT TGCTTCTGAG AAGTGCGAAT CACGCTGTCT CGGCTCGTTT
GCTGTTTCGG ATCCATTTAC TTCACCATGG AGAATATGTC AGATTCTGTC CTTGTTTCAA
GATGCAAACA GCCGCGACCT CTCCTATTTC GCTCAAGTCC GTTGGTTTTA TCGCGACGAT
GAGATTTCCA AGGAATCGTC AGGTATTTGT ACACCTCAAT GCCTGGACGT TGTGTATGAA
AGCCGAGACG TGCACGACGA GCCGATAGGT CTTTCAAATT GTTTGGGGCC AGTTTCTCTG
CTTTCATCGT GGAGTGCAAC GATTACAAGT CCACCTTATC TACCACTAGT CCGCGCAGTC
TATGGTGGAG AATACTGTAG CAAAATGGGA AAGCTGATGG GGCGCTCGAC GGGCTCTATA
CTGAAGTTTG CTTCCGTCGT GGAGCGGGGG CTATCTCTCT CAACCTACTA TTCACAAACG
CAAAAAGCGG AAATAATGCA GGCAATTAAA TCTCACGTCC GAAGCAGAAC TGGAAGAGCA
AGCGACTCTC TTGTGCCTCG CCAAACGGTT GAGGAAGGCA ACTTGAACGA CTATCCGGGT
TTACCGTCAG CAATAGTGTC ACCACCTGCT CAACCAAGTA GAAACGAATC ATTCGCTTTC
ACCTCGCAAC CGCCGTTTTT TGTCGACTCC AAGGAGGGAG TTGAATTCTT TACAAGTATG
GATATTAAAC CTTGCTTCTC CAACTTTGCC GTTAGCTCGG AGAAAGGTGT CGCCGCCCAG
GATAAGACTT GGTCTGTCAA TATTGGGGAT CCGGTTTTAC TGAGCTACGA TGCTCGAATG
TGTGCGGGTA AAACCACGTT TGGGGTGGAA TCAGGCTCAC TAAGTACCCA GCCTTTTTTC
CCAATGAACG TACCATGGTC AGTAGGTGAG ATTGTCCTGA TTTGGAGGCC ACCCAACAAC
CCGAGTTCCG AGAAGGTTGG TGCCCATGAG ACTGCAAACG ACCTGAAAAT CGAGGTGCGG
TGGTTTTACC GATCCGCCGA ACTTCCTGGT GGAACGAGAA ATCAACTAGG ATATTCTGAT
ATAGAATGCG AAGAGATTGT GGAGACCGAT CACTGCGACT CCACAATAAA TGCTTCTTCC
GTCCTATCAC CTGTTGTTCT TCATTCGAAG TCATCTCCGG TTTCACAGCC ACGATTTCTT
CATGGAGTTC CTGTATTGGA GTTTTTTTGT CGACGATTTT GGTCTATTCA TCGACGAGGC
CTAGTTCCAA GCGGTGGATC AGCTGCCAGA CTGCTGCGGT CAAGGAGACA TTCTTCCTTT
TTTAGTAGCA ACCAATTACT CAAAATTGCA TTTGAAAAAA TTCAAAGCAA AAGCGAGCAT
CATATTTATG CGCCTATATG TTCATTGCGA GAGTGTTCAG TGTGGAAAGC TGCATTTTTT
AGAGTCATCA ACAAGCTTTC TCTAACAGAT GCTTCAAAAG AAGCCAGTCA AGATTCGCTG
GCACTTGTTG GCCGCGAAAA AGAAAAAGAG CAAATAACCT CGTTCCTAGA GGCTGCGATA
GCAGGAAAGG GAGAGAATAC CAAACCGTCG ATTTTCATTG CAGGTTCCCC TGGTGTCGGC
AAAACAGCCT GTGTACGCGC CATGGTATCG AGTCTGCAAG TGCGGGCCAG CAAAGGCCTG
CTTCCAGTTT TTCATTTTGT CGCTCTGAAT GGGATGGAGT TGAGGCATCC TTTGGAAGCC
TACGTAAAAC TCTGGGAAGA GCTGAGTGGT TGTAAGGCTA AGTGCTCTGC TGAAACAGCA
GCTTCGAGGC TGGAAGCATA TTTCACTAGC AACGAACATG GTTGCCAAAA CTCCGAGGAA
GACAACCAGG TCGTTGTGCT ACTGCTTGAT GAGATTGATT ACCTGGTGAC CAAGAAGCAA
ACTGTCCTCT ACAATTTCTT CGACTGGCCA TTAAGGGCTT TGGAATCCAG ATCCGCGAGG
CGGCTCATCG TTCTTGGTGT TTCCAATACA TTAAACCTCC CAGAGCGTCT CCATCCTCGT
GTACAGTCAC GTATCGGTTC AAGACGCTGC TACTTCAAGT CATACGATGA TAAAGAAACC
GTTGCAATAT TGAAAGCAAA GGTGAAGCAA GCTTCTCCAA CTTACGCAGT CTTTGAGGAA
GACGCCATTG TCTTTGCTGC TAAGAAAACA GCTGCGCTCT CCGGCGACAT TCGAAAAGCA
TTCCACATAT GCCGTGCTGC CGCCGAGACA ATTTTGCGCG ATTCTGAAAA CGACGATAAT
ACAGTAGTTG CTCCTATCGT CCGGATCAAG GATGTTGTGA AAGTCAGTCG AGAGTCTTTC
AATTCGACCC AGTCAAAGGC TATCTCTCAT TGTAGCTCTC TTGAGGTTCT TTTCCTTGTC
ACCGTTGCGT CTTTGTACAA GACAACTGGA AGAGAACATG GAGGCTTTGA TATAGAGGAG
ATCTTGACAA AAATGGAAGG CATTTCCAAC TCTATGGGAA AAGTTGAGTA TTTGCCTGCA
CCTTCGCTAT TCGAGACCTT AAAAATCTCT CAGCGTTTGG CCGAGGGTTA CCTGATCTCC
GTACAAGCAC CTCGCCTCTC AAGTGTGAGT TACCGTGCGT CGGTGGCAGG GAGCGGAGGT
ACTTGGCCGC TGGTGTCGGG ACTGTTGGAC GATGTGGCAA TTATGCTTGC TTTGAAAGGG
AGCGAACACC AGGAGCTGAC TCACAAATAC CTGGCTATTA ATAGCTTTGT TGGCAGGCAA
ATAGGTCTCG CTCCGGCACA ACAAAGGAAC AGGAGATTGG CATGATTGTT TGGTTGTCCG
ACGAACTATG AATGAACATA GTGAACCCAT GCCACGTCCT TGTAATTCAA GTACAACTTG
AATGTGACTG TGAGCAATTT TTTTCTGCAG CTTTGAAGCG TCAAGAGTCC GCAATGTACA
ATTGTCCCTA AAAGAATCAT TCAACGCTTC
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| Protein sequence | MPKRSLPQSS AVTANQWTVA AIHPASDAVW HEEQASTLTR YFSAVDVLWQ QPSLPHSQSH
SPMLWLQQKV HVGDVCAFVV PTGLRQDPFL DQSWMVGQVL VLASRASLTH SARLHALVRW
LPHAKQVETW MPLPVYKRWT TTYRPAQLLL ETLQCQTIAL AHLLPATVRI RPTQHFTTQT
ALPPEPFPDM PFWRLYFHVP KRWYRPDEPH RNHHELPSER VGPQWSHPHT ELTLARAWTA
AVAEGILPPE LHRRLTNVRC PNQHPTPAWL ATVHDHQPPT NRKSDAPSTD TVETTTETTS
RKKARPSPSP TVSTTDPALA VQPASKIVHR ATRDGVTRAF GTALRIPLQP SDTHRSVLAN
AQTCIVRVGD AVVMACDDAR TPLRDAGPRP WYPWTRPWSV AIVLAAVDTH DEYQFQVRWL
ANAQELPSGV LTKASHSIRA DWKRPEHVPY LLAVTDAVDT VPAEAVLGRV AWVPCPPPRP
RYVLRGVPQI QRVAKYRLDR HRLRYIEVGT AQSLRQTLVT RAWQLPESFI HQDAQLRQIY
RTQLGLSEDA DEDLSDPQDT VQAETDAALA DPATKGPLAW LNPVTNVRSV PNRPLLARTN
NFEFFEVVSV AVVPRFCDRK VTAKKTTETR WNVRIGDVVC LADSDSTPPP PPSPQANKAR
WYPFVGPWRY AQVLSIYRVP GADDSKIRLE IRWLFRTTEL PLHVRARIPV VTDSAREVVW
ETDSVQSDVP AARVLGRAKV FLGHHVDAWM GTGTEIDSVP HVAARCSYLY FSTSERFQPL
FCSGTTTIQW FQRLMERGFY FSDMVRKNQP LGSAIEFCLN ISVCGGENGC GTHDLFEDLV
ARKEDSIDKA DHEALLQSSE PKGGLRHFVS VSIVPPWTSF LHSDVVCRER DRRGLEWTLR
VGDVVAVASE KCESRCLGSF AVSDPFTSPW RICQILSLFQ DANSRDLSYF AQVRWFYRDD
EISKESSGIC TPQCLDVVYE SRDVHDEPIG LSNCLGPVSL LSSWSATITS PPYLPLVRAV
YGGEYCSKMG KLMGRSTGSI LKFASVVERG LSLSTYYSQT QKAEIMQAIK SHVRSRTGRA
SDSLVPRQTV EEGNLNDYPG LPSAIVSPPA QPSRNESFAF TSQPPFFVDS KEGVEFFTSM
DIKPCFSNFA VSSEKGVAAQ DKTWSVNIGD PVLLSYDARM CAGKTTFGVE SGSLSTQPFF
PMNVPWSVGE IVLIWRPPNN PSSEKVGAHE TANDLKIEVR WFYRSAELPG GTRNQLGYSD
IECEEIVETD HCDSTINASS VLSPVVLHSK SSPVSQPRFL HGVPVLEFFC RRFWSIHRRG
LVPSGGSAAR LLRSRRHSSF FSSNQLLKIA FEKIQSKSEH HIYAPICSLR ECSVWKAAFF
RVINKLSLTD ASKEASQDSL ALVGREKEKE QITSFLEAAI AGKGENTKPS IFIAGSPGVG
KTACVRAMVS SLQVRASKGL LPVFHFVALN GMELRHPLEA YVKLWEELSG CKAKCSAETA
ASRLEAYFTS NEHGCQNSEE DNQVVVLLLD EIDYLVTKKQ TVLYNFFDWP LRALESRSAR
RLIVLGVSNT LNLPERLHPR VQSRIGSRRC YFKSYDDKET VAILKAKVKQ ASPTYAVFEE
DAIVFAAKKT AALSGDIRKA FHICRAAAET ILRDSENDDN TVVAPIVRIK DVVKVSRESF
NSTQSKAISH CSSLEVLFLV TVASLYKTTG REHGGFDIEE ILTKMEGISN SMGKVEYLPA
PSLFETLKIS QRLAEGYLIS VQAPRLSSVS YRASVAGSGG TWPLVSGLLD DVAIMLALKG
SEHQELTHKY LAINSFVGRQ IGLAPAQQRN RRLA
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