| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45108 |
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| Symbol | |
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| ID | 7200305 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 212044 |
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| End bp | 213920 |
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| Gene Length | 1877 bp |
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| Protein Length | 571 aa |
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| Translation table | |
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| GC content | 52% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179385 |
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| Protein GI | 219117181 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TCCTTCGTCT TGTCGGAATG GTTCGTCATC CTAAAGTCCA ACAGCACTCG GTCCAAAAGC
AACACCAGAG AATAACATCG CGTCCACATG ATCGCCCCAA CGGAGCCCGA CCAGCAGTCG
TCGAATCCTG AGAGGGACGT TTGGACGCAC GTACGGCACT CACTCTGCGA CGAGTGTCGC
CCAAGGCTAT CCACCAACAA ATGTCCTCGG GAGGACCCAT CCACACTCTC CCCGGCCAAT
CGTCTGGCAC CCGCAACGAT CCAATCTCCT TGTCCCGTGT GCCTCGGCCT TTCCTCCCCC
GAGTTTGCGA ACCAGCTAGA GGCATCGGTG CGACAAGCGT TGAAGCCGTA CGGATCACCG
TGCGAGAACC GCTTCAGCCA AGAGACGGAC CAACCCACCC TCATCCTGCC CGGGGATTTA
CTGTATCGCT ACGGAGCATT GCAACGTTGG TGGAATCCCG TATTGTCCGG CAACAACAAC
AATGACTCGA TTCTCGCACT GGGACAGACT TTCAAAACGC GAGCCCGGGC ACTCGTATCC
AACTGCGTTC AAGGCCTGGT ACAATCGAAT TCAACATCGG GTTCCCACTA CCCACAATAT
GTACAGGACG AGGAACAGGG CTACTTGAGT GTGTATGTCA TTGCCGTTCC CCATTCCACA
TTGCATCGAC CTACCCATTT GTTTTCCGGT GGTGGTACCA GCAAACGACG TAGGCACCAT
CGCCATCTGG ACGTTTCCGA AACACAACAA GGAGGCGATC CGCGAAAAAG TCTCGAAGAA
AGAATGAAAA AGCAGGGAAT TACCGTTTGG TCCTTGAATC AGGCATTCAA CAGCAATTTA
GACTTAATTT CCGAGGAAGC CGATCGAAGT ATCCTCGAAC AGACGAAAGC AATGTCCGAG
CACGCCTCTG GCTTTGACTT TCACGTGGCC GTTTGGCGAC GACCATTTTA CTTGCGTGGA
CTCTACACCA AGTTGCGTCG GGATGTTTCC CAAACGCCGT TCTTCGTCGT GGATGAGGGG
AAGCGACGGA AATTGGGAGT GACATCGGTC GAGGAGCAAA TCGTGCCGGT TGTCTCACGG
TACAGCGGGG GAATATCGTG TCACAATAAG GATCCTTCCC TACCCGAAAA CGTCGTCTTT
GGTATGTGTA AATTTCATGC TTCGGGGCGG GAGGATATGG ATGTCCGAAT GCTACTTCCG
GAGGCTAATG CTTCGGACAC CTCTAACCGG CTCGCTTCGG GGCGCCCTTT TGTCTGCGAA
GTAATTGACG CGTTGCGACT GCCCAGCGTG ACGGACCTAC TGCGCATAGT CGACAACGTC
AACAAAACCA CAAGTGTTAA CGAGAATATG ACTCTTCCTC GATGCTACGG CCGCAATGAC
ATGACCTCGA TCTCTCGCGA TTTCTCTTTC GCTCCCGCAT CCTCGTTTAA AAATTTGCAG
GCCGAGACGG AAGACAAAGT AAAGTTCTAT GGCTGCCTAT GTTGGAGCGC CACCCCATTA
CCAAAAGAAG ACGAGGATCT CAAGAAGCTT TTGGGGACAT TCCCGCTACA ACTCAAGCAA
CGTACCCCCA TCCGTGTTTT GCATCGCCGT TCCAACATGA TTCGCGTCCG TCATGTTCTT
TCCGCCCAGG CTCATCGAAT CGACGACCAC TATTTTCGAC TTCATATAAG TACGGATGCC
GGTACATGTG AGTCGTTTGA GAAAGCGCGT AGCCTTGTTT TCTGGAATCT TCTCACCAAT
CGTACATTTT CTGTTCTGCA GACGTGAAGG AGTTTGTGCA CGGCGACCTT GGCCGAACAG
TCCCGTCAGT ATCAGCGCTT TTGAAATGCA AGACAGATAT TTTGGAACTG GATTGCGAGG
GCATTCAAAC ATCGTAA
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| Protein sequence | MIAPTEPDQQ SSNPERDVWT HVRHSLCDEC RPRLSTNKCP REDPSTLSPA NRLAPATIQS
PCPVCLGLSS PEFANQLEAS VRQALKPYGS PCENRFSQET DQPTLILPGD LLYRYGALQR
WWNPVLSGNN NNDSILALGQ TFKTRARALV SNCVQGLVQS NSTSGSHYPQ YVQDEEQGYL
SVYVIAVPHS TLHRPTHLFS GGGTSKRRRH HRHLDVSETQ QGGDPRKSLE ERMKKQGITV
WSLNQAFNSN LDLISEEADR SILEQTKAMS EHASGFDFHV AVWRRPFYLR GLYTKLRRDV
SQTPFFVVDE GKRRKLGVTS VEEQIVPVVS RYSGGISCHN KDPSLPENVV FGMCKFHASG
REDMDVRMLL PEANASDTSN RLASGRPFVC EVIDALRLPS VTDLLRIVDN VNKTTSVNEN
MTLPRCYGRN DMTSISRDFS FAPASSFKNL QAETEDKVKF YGCLCWSATP LPKEDEDLKK
LLGTFPLQLK QRTPIRVLHR RSNMIRVRHV LSAQAHRIDD HYFRLHISTD AGTYVKEFVH
GDLGRTVPSV SALLKCKTDI LELDCEGIQT S
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