| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45098 |
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| Symbol | |
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| ID | 7200177 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | - |
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| Start bp | 192159 |
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| End bp | 194485 |
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| Gene Length | 2327 bp |
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| Protein Length | 647 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179381 |
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| Protein GI | 219117173 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTGC GCGCGCCCAA ATTGGAGAGC CGTTGGCATC CCGAGCGGTA CTTGGCGAAT
GACCATGACA AGTCGGGGGG GTACCGCCGC CGAGTTCCGT TCCCAAGGTG TGAGACAGTA
GGGTGCGGTA CGATCTACGG CATTCGAAGC AACACAAACG TTGGTACGCC AACGAGGCCA
TGAAGGATGG CACCGTCCAC AAGTACCATA GATCGAAGAC ACGACAGTCC TCCCAGCATG
TTGCGCAATC GAGGCGGACA GCAAGTTCCA GTATCGTACT ACGCAACGAG TCCGGAGTCG
TCTCCGAGAG AGAACGGGTA TCTTAACCCG GATCCTATTG TAGAAGGAAT TGACGAAAGG
ATTCCGCAGT CTGCGTCGGG GAGAAATCAC CTATCCAGAA TATCTAACAG AACAGTGAGA
AACCATGCTT CCCTGATAAT GAGCCACGGT GTACATAGCC GCGTTCCGTG TCCGACACCT
GTGGTGGTGG TGCAACCAAC TATGGAAGTC GCGACTTCCG GTGCCACGCG ACTTTACGCC
TCCCTCCTCG CTTCCCTCCT CGTGAGCATT ATTCTCTACA ATTTGACATC GAATGACACG
AACATCACCA TCACTAAGGC GTACAACCCG ACGGATCGAT TCCATCTCCC GCCGCAATTG
CCACACCAGT TGCCTTCCAA CGATCCGTCG GCGTACACGT TTGATTCCTT TTTTCTCATA
CTCATGCGAT TCCTACTCTT GACGACCGTG GTCGTCAACG TTGCTTACGT AGTCGCCTTT
TCTCAGCAAT CCTTGGCTTC TCGATCCTTG TGTCTATCTT CCTCAAGATG GCCAGCTCAA
TCGCGTTGCT ACCAATCCGC GAGTCCGGGC GATTCCACGA CGACGACGAC CGTTCCGTCA
ACGAACGGTC CACGCCGTGG ATACGCACTG GAAGACGACT TCCACCTCCT CACGGACGAA
ACACTCCGCT CCGTTGAATT GGATCGCCGG GAACGACAGG ACTACTCCAT GCAGCGCGTG
GCTTTGCGCA CGGGCGTGGT AGCATCCGAA ACGCCGGCAT CGTCCGGGTT GCTGGATCCA
CCGTCCCTCA CGTTGGGCCG CGCCCTCGTT CTGGCCGCCG CCGCTATTTA CGGCACCAAT
TTTGCGGCCG TCAAGCTACT CGACGAAGCC ATGCCCATGG CACTCAGCGC CGCTCTTCGA
TTCTCACTAG CAGCCGTCGT CGTTACCTCC ATTGTCCTCG CCAATGAACG GAAAACGAAC
AATCCGCAGA CCCGAGAAAC ACGCTGGGGC GCAACCCTCG CCGGTGCAGA AGTCGGAGCC
TGGTACTGTA TCGGGTATAT TTGCCAAGCG TCGGGACTGC ACACCTCGGA TGCGAGTAAG
GTACGGACGA CGAGATGTCT AGTGGCGCGT TCGTATATCT TTGTGTGTAC TGACTGGTAA
AGCGTAACAA ACAAGCACGA GTCTTACCCA CTCTTCTTGT TTTGGAAATT GTATCTCTTT
TGCAGAGCGC ATTTTTCAAT GCACTGGCCG TCATTGTGGT CCCCTTGCTC GATTCCTTCT
TCAAGGGCAA AAAACTGGGG GGCCGCGGTC TCGCCTCGGT CGCCATGGCC ATTGGCGGAG
TTGCCCTCTT GCAAATGGGT CCGGCCTTGA CCGGGACATC CGTCGGCACC AGCCCCGCGG
ATTTTCCCGT TTCGGCGGGA GACATGTTCT GTCTCGCGCA GGCGCTCTTT TTTGGTATCG
GCTACTGGAG ATTGGAGGCT GCGGCGACCC AATTTCCGCA TCAGGCCTCG CGCATTACCG
CTGGCCAGCT CTGCGCGGTG GCCGCGGGGT CAGTGCTCCT GTTCGTGGGG GCGGATGATC
TACCCACTCT ACAAGCACTC GAACACTGGT TGACCGACGG CTTCATCGTC AAGACTATCA
TTTGGACCGG ACTGTTCTCC ACCGCGTTGG CCTTGTATTT GGAAACCGTC GCACTCAAAG
TCGTGTCGGC CACGGAATTG ACGGTCCTCA TGACGAGCGT ATCGTTGTGG GGATCAGCCT
TTGCCTACGT GACCATGGGC GAAATGCTGG ATCGACTGGG ACTCCTCGGT GGTCTCTTGA
TTTTGACGGG ATGTGTCCTC TCGTCGACGG GTGGCAGTCC CAACGCTATC GGCAACAGCA
AAGACTTTCT CAATAAAGAC AGTGACCATG CGTCGTAAAG GAATGGCCAA GCGATGACTC
ATTGTCTCGG GCGACCACAC TTTTTTGGGC GTTGTTGCTC GGGTCGTCCC GTCGACACGG
GTACTATCGG AACAAGATAG ACCGATATAA ATACCATTGT ATACAGT
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| Protein sequence | MAVRAPKLES RWHPERYLAN DHDKSGGYRR RVPFPSMLRN RGGQQVPVSY YATSPESSPR
ENGYLNPDPI VEGIDERIPQ SASGRNHLSR ISNRTVRNHA SLIMSHGVHS RVPCPTPVVV
VQPTMEVATS GATRLYASLL ASLLVSIILY NLTSNDTNIT ITKAYNPTDR FHLPPQLPHQ
LPSNDPSAYT FDSFFLILMR FLLLTTVVVN VAYVVAFSQQ SLASRSLCLS SSRWPAQSRC
YQSASPGDST TTTTVPSTNG PRRGYALEDD FHLLTDETLR SVELDRRERQ DYSMQRVALR
TGVVASETPA SSGLLDPPSL TLGRALVLAA AAIYGTNFAA VKLLDEAMPM ALSAALRFSL
AAVVVTSIVL ANERKTNNPQ TRETRWGATL AGAEVGAWYC IGYICQASGL HTSDASKSAF
FNALAVIVVP LLDSFFKGKK LGGRGLASVA MAIGGVALLQ MGPALTGTSV GTSPADFPVS
AGDMFCLAQA LFFGIGYWRL EAAATQFPHQ ASRITAGQLC AVAAGSVLLF VGADDLPTLQ
ALEHWLTDGF IVKTIIWTGL FSTALALYLE TVALKVVSAT ELTVLMTSVS LWGSAFAYVT
MGEMLDRLGL LGGLLILTGC VLSSTGGSPN AIGNSKDFLN KDSDHAS
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