Gene PHATRDRAFT_45087 details

Gene Information

• Locus tag: PHATRDRAFT_45087
• ID: 7200172
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 164238
• End bp: 164825
• Gene Length: 588 bp
• Protein Length: 184 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179145
• Protein GI: 219116701

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.626459
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GACACCAACG ATGACGACTT CCAGCCCTTC ACAGTCAATA TCGGTCTCTG AATCTCTATC 
TTCGCTGTCA TCACGTATAC ATTCGTCCAA GGCGCAGGCG GAAGTCTCTC TGAACAAGGC 
ACAGGATCAG CTGTACGTTG CCAGGCCATT TTTGCCTACC AACTGCCTGA ATCACATGGT 
GTCGAACCAT GCAAGTCTAA AGGCTGCACA CGCGGCGTTC GTATTAGACT ATGAAAAACG 
AAAATCACTG CGACGGCAGA AAAGGGAAGT CTGCTTTGAA AGCGATTACG GATACGACGA 
AGACTTGGTA GAGCCAGAGC CCAAAAGACG ACGGTTCCAG CGCCGCAATT CGAAGACTCC 
ACAAATGCTC ATGGCCATGA GTCCTTCATT GCTTTCCCTG GATTTTCTGG ATAAAGACAA 
AAATGAAGGC CAAATGAAGA CAATATCGGA GATACCATTA TCGTTTAGTG ACGACGAGGA 
TGATGACGCC TGGGACGGTG GGCTAGAAAT TGCAGAAGAA CTCGTCAAAC ATCTACAAAA 
ACGAAGAGAT TCTCAAATTG CTTAATTTCA CAAGCAGCTG GTGCCACG 

 

Protein sequence

MTTSSPSQSI SVSESLSSLS SRIHSSKAQA EVSLNKAQDQ LYVARPFLPT NCLNHMVSNH 
ASLKAAHAAF VLDYEKRKSL RRQKREVCFE SDYGYDEDLV EPEPKRRRFQ RRNSKTPQML 
MAMSPSLLSL DFLDKDKNEG QMKTISEIPL SFSDDEDDDA WDGGLEIAEE LVKHLQKRRD 
SQIA