Gene PHATRDRAFT_45070 details

Gene Information

• Locus tag: PHATRDRAFT_45070
• ID: 7200080
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 110014
• End bp: 112170
• Gene Length: 2157 bp
• Protein Length: 571 aa
• GC content: 57%
• Product: predicted protein
• Protein accession: XP_002179362
• Protein GI: 219117135

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.183935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GGGTCTGGCA CACACACACT GCCTGTTTGG TCTCTGTTGA CTCTCACTTT TTGTGTGTGT 
GTGCGCTGGC AGTTGCAGTT GCAGTTCTCG TCGGTTCCAT TCTCACTCAC AAAAAGTTGT 
ATCGGTTCAG AAAGTTGTTC CGTTTCGAGC GCTTGCACCC AACAACACAA CTCACGCCAA 
GGATTGGGTG GGTTCGGTCC GACTGCCTCA GAGGAAGAGT CCAAAAGCAA ATCCCTTTTT 
ATTGTGTTCT GTGTTTCCCT GGCCCATTCC ATTACCACAA TTCACACCAA CACACACAGA 
CGTTCGCCAT TGACCAGTCT GTTGTGTAGA TTTGCTTCAA ATTCGTTCTT GCTGTACCCA 
TTCCGAACGT ATTTCGTTCA CAGTATCGTG ATGACCGACG TTCCGCAACT GCGCATTGCG 
AACACTGCGA ACAATGGGAA CACTGGGACA GCGTGTCCAC GCAACCGCTC CGTCCTCGAC 
TACGACACGG AAGCAGCCTT GTTGGAGGCC TTGCAAGGGG TTCACATTAG TCCCCGCGTC 
GTTGTCCCGT CCCGCAACGA GGAGCCTGCG TCCACCGTCA CCATACCACC ACAACCCACG 
ACACTACAAG TTACGGAATC CGCATCCGCA ACGCACGTGA CGGACTGGAT CATGCCCGAC 
CATCCGACCA GCTCGGATCG GACGCGACAA ACGCCCGAAC ACGAGGCCGC CCGTCTGTTG 
GTGTTGCGCT CGTACGAAAT CCTCGACTCG TCGCGGGACG ATCCGGCGTT CGACGCCATT 
ACACGGGAGG TACAGGAACG CTTTCAAGTG CCCTGGGCCT GTCTTTCCCT CATTGACCTC 
GGTCGGCAGT GCCGCAAAAG TATGGTGGGG GACGGATTGT CCCCGCGAGA TACGCCCCGG 
CGCGACACCT TTTGTGGACA CACCATTCTC GACCCGTCCG GACTACTCGT GGTCCCCGAC 
GCGACCCTCG ATCCCCTCTA CCGTCACAAA CCCGCCGTCC AAGGATCCAT GGCCCTGCGC 
TTTTATGCGG GGTGTGCCGT TACCACACCG GAAGGCTACC GATTGGGTGC CCTCTGTTTG 
CTCGATCGCC AACCCAGACC GCAAGGTTTG AACGCCGACG ATCAACGGGA TTTACGAACC 
TTTGCCGATC GCGTCGTGCT GGAACTCGTC GCTCGACGCA ATCGACTCCA ATCCGGACGG 
AAACGATCCG CCAGTCTCGC ACAAGATATC AAGCTTCCGT TTGGATCCAT CCCGACCGCG 
CCTTCCAGTA CGACAGCCTC CGAAACCGAT TCGTCCGGCA CCGGCTCGGA CCACGGGACG 
TCCCCACCCG ATTCGCCGCC GCTCCGTCGC GACGAAAACA AGCGTTCCCG CGTCGATCTT 
CAGGCCTTGC AACACGCCAT TGTACCGGAC ACGGCACCAA TCATGCCGGC CGTTTCCAGT 
TCCAAAACCC ACGGTCCACC GTGTGCTCCC AAGCTTTGCA CCGACCTGAT GATTCCCCGA 
CCACCCCCCA ACGTTCTCTT GCCTGATCCG CAAACGAGTG GAGTGGATCC CGATACCTAC 
CTAGTACAAC TCGTCGAAGC CTTGTGGGGC GCCAAGCTGG TTGTCAAGCC CGCACTGGAA 
CTGGAAAACT TCTTCCCCGT CATTTCCGAA GACCAAATGG CGGCCTACAA CATGACGGTC 
GTCAACCTCG CCCGCAACAA TCAAGTCGAT CAACTCCGCA CGTACTACCA ACAACACGGT 
CGCACCGTCC TCGATTGCTT CAATCGCTTC GGCGAAGGTC TGTTGAACAT GGCCTGTCGG 
CGTGGCTTTG TCGATATGGT GCAGTTCCTC TTGGAAGACG TGGGATTGAG TGTACGGGTC 
CGGGACGATT ACGGCCGCAC CCCACTGCAC GACGCCTGTT GGAATCCCAC ACCGCAACTC 
GCCATTGGTA CCTGGATTAC GCAACGCGAT CCGGTCCTCT TTTTGATTGC CGACAAACGC 
TCCTACACGG CCTTTCAGTA CGCCCGACAG TCCGACTGGG CCGTCTGGAG ACAATTTCTG 
TGGGATCAAC GGGAATGCCT CCACGGTTTG ACCGCACCAC ACGTGCTCGC GCAATTTTCG 
GCCTAAAATC CCCATTTTAG TCGGTACCCC AACCATACAA CAAAGTGTTG TTATTGC 

 

Protein sequence

MTDVPQLRIA NTANNGNTGT ACPRNRSVLD YDTEAALLEA LQGVHISPRV VVPSRNEEPA 
STVTIPPQPT TLQVTESASA THVTDWIMPD HPTSSDRTRQ TPEHEAARLL VLRSYEILDS 
SRDDPAFDAI TREVQERFQV PWACLSLIDL GRQCRKSMVG DGLSPRDTPR RDTFCGHTIL 
DPSGLLVVPD ATLDPLYRHK PAVQGSMALR FYAGCAVTTP EGYRLGALCL LDRQPRPQGL 
NADDQRDLRT FADRVVLELV ARRNRLQSGR KRSASLAQDI KLPFGSIPTA PSSTTASETD 
SSGTGSDHGT SPPDSPPLRR DENKRSRVDL QALQHAIVPD TAPIMPAVSS SKTHGPPCAP 
KLCTDLMIPR PPPNVLLPDP QTSGVDPDTY LVQLVEALWG AKLVVKPALE LENFFPVISE 
DQMAAYNMTV VNLARNNQVD QLRTYYQQHG RTVLDCFNRF GEGLLNMACR RGFVDMVQFL 
LEDVGLSVRV RDDYGRTPLH DACWNPTPQL AIGTWITQRD PVLFLIADKR SYTAFQYARQ 
SDWAVWRQFL WDQRECLHGL TAPHVLAQFS A