Gene PHATRDRAFT_45068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45068 
Symbol 
ID7200079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp107320 
End bp108928 
Gene Length1609 bp 
Protein Length479 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179139 
Protein GI219116689 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGCAGC CCACCGCTAC GTTAACCATG AATTTCGCTC TCGCTTGCCA AGTCTTCCTT 
GCTTCTTTTG CTTTGGTCTC TGCCCATGAC ACCCGGGGAC GAAGGCTACG TTTGCCGAAG
CGAGTCAAGA TAACGAAGAT GGACTTGCCA GAATTCATGC CAACTGAGGA TTTGCCCGAA
ATCACGCCAA CCGAGTATTT GCCCACCGAA TTTCCCTCAC TCACTCCTGA TAGCGAGTCA
CTCGAGTTAG CAAGCGAGTC TACTTCCCTA GTCCCCAGCG ATGCCCCTTC AATGGTCCCG
TCGGATGCCC CTTCAATGGT TCCCTCGGAT GCACCTTCAA TGGTTCCCTC GGATGCACCA
TCCATGATCC CCTCAGACGC TCCTTCCATG GTTCCAAGCC CTTCTCCGAC CCCTTGGCCA
GATGTCAAGT GGGCGCCCAC ACTGAACGAC ATTAACAGTC CTGGTGAGGC TCCTGATTTT
CTGTTTGGCT CTACTCTTTC CATGTCCAAG GATGGGTCTA TCGTCGCTGT CCTTACTGGA
GGATTCAATG GAACCGTGAG TGTATACGAG ATTAATTCGG ACGGCTGGGC CCAAATCGGA
GAGCCCATTC CAGCTATCAA TAACCAAGGT ATACAATTGA CGCCGGATGG CACTGACTTA
CTTGTGCACG GTCTAGATGC GCAAGTATTT CAATTTGTAG ACAACGCGTG GATTCAGGTT
GGTGAAGACA TACCATCGCA ATCAACTGAC TCCAGCAGTT CTATTTCCGA CGATGGACTG
ACAGTGGCTA TCGGCCTTCC TGGGGCCACC ACTCTCTTTT CATCGGTGGG CTCGGTTGAG
GTTTATTCGT TCGATGGCTC CGCCTGGAAC CTAATACGCA CAATTGATGG AGATGAAAGC
GACGATCGAA ACTTCGGGCG TCACTTGTCT CTTTCCGGCG ACGGCAACAC TCTCTCCGTT
TCTGGTCGCG GAACGTCTTC CATTGCCAAT GTGTACGTCA AAACTTACCA TATTGCTGAC
ACTGTCTATC TGCTGGGCAG ACAAGACGCT GCACCGAACA ATGGCAACTA TATAGTTCCC
TCGCTTTCCA GAGATGGAAG CCGCTTGGCA ATTCTCGATC CGGCAGGAAA GGTGCGGTCG
TTCAAGTTTG AAGCAGCCGA GTGGAAAGAA GTGAGCAATG GGTTGCCCGA GAGTTTTGAT
CCAAGGGTCG TCCGTGGTTC CACGGATGGT ACCTCCCTGA TCATGTGCAA TCCCAATTTG
GGAACCGTCA AGGTTTTCGC CCTGGATGAA GAAACCTGGG TTGAACGAGG CGAAGACATT
GGTGATGCCG AGATAGTCCT GTTGGGACGC GACTGCGCAC TTTCGGGAGA CGGTTCCATG
GCCGTCGCTA GTGGATGGAT TATGAAAGGA ACGGCGGATG GTGTCATTGG CTTTTGGCAA
GCGGAGGTTG TGGCAGACGC AGAATAGTGC ACGTCGCCCA GAGTTGATTC GGCAAAGGCA
ATGACACGTT CCAATCATAG TTAGGTGCAT TTGCGCTACT CTTAGAGGTT ACAGCGTCAC
GTAGTGATGC ATTCTATACA TTTCCTATTA CTCAAGATTG ATTTGTGAC
 
Protein sequence
MNFALACQVF LASFALVSAH DTRGRRLRLP KRVKITKMDL PEFMPTEDLP EITPTEYLPT 
EFPSLTPDSE SLELASESTS LVPSDAPSMV PSDAPSMVPS DAPSMVPSDA PSMIPSDAPS
MVPSPSPTPW PDVKWAPTLN DINSPGEAPD FLFGSTLSMS KDGSIVAVLT GGFNGTVSVY
EINSDGWAQI GEPIPAINNQ GIQLTPDGTD LLVHGLDAQV FQFVDNAWIQ VGEDIPSQST
DSSSSISDDG LTVAIGLPGA TTLFSSVGSV EVYSFDGSAW NLIRTIDGDE SDDRNFGRHL
SLSGDGNTLS VSGRGTSSIA NVYVKTYHIA DTVYLLGRQD AAPNNGNYIV PSLSRDGSRL
AILDPAGKVR SFKFEAAEWK EVSNGLPESF DPRVVRGSTD GTSLIMCNPN LGTVKVFALD
EETWVERGED IGDAEIVLLG RDCALSGDGS MAVASGWIMK GTADGVIGFW QAEVVADAE