Gene PHATRDRAFT_45046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_45046 
Symbol 
ID7199925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp47681 
End bp48338 
Gene Length658 bp 
Protein Length148 aa 
Translation table 
GC content48% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179347 
Protein GI219117105 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.786213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTCG GCCACTTTAT GACCAAAGCC TCCGATGTTG TGACCTGCTC GGAATGGGAT 
CCTGTATTGA ACGTTATTGA TGCCGTGCTG GATCACAACA TTTCTGCCGT CGTTGTCAAC
GACAAGACTC ACAAACCAGT AGGCATCATC ACGAAAACAG ACCTTGTTCG GGCCTATAAG
AACGGCGTGA ATTTACACCA AAAAGTTGGT GTCATCATGG CGACCAACTT ACGTACAATA
CTTGACACGT GTTCCCGAGA CGACGCGGCC AAGTTTCTGG AAAAAAATCG CTTACACCAC
GCCATCATCG TGGACAAGGA GGGAAACTTT GCCGGAATTG TGAGTGTTTG GGACGTGGCC
TCCGAAATGG CCAAAGACAG TCGCGCTTGG CCTTGGAACC GTACGGTGGA CGGCCGAGTG
GCACCCATGA TGGCGGGTGT GCATTAGGAT CCCCATACGT GCAAACAAAG ATGTGTGCTA
CTGGTATGGG ACTGTGTACC ACGTTTTTTC CAATTCATGA ATTGCCAGTT GAGACGCTTT
ATTGCTCTAT TACACTGGTG CCATCCTATT AAGCTCAAGC CTTCAGCAAT TACTTACAAA
GTTACGCTGC CTAGAAAAAA TCACTTTACA TTAATTAGTT ACCTTTGTTG ACCCCTTC
 
Protein sequence
MLVGHFMTKA SDVVTCSEWD PVLNVIDAVL DHNISAVVVN DKTHKPVGII TKTDLVRAYK 
NGVNLHQKVG VIMATNLRTI LDTCSRDDAA KFLEKNRLHH AIIVDKEGNF AGIVSVWDVA
SEMAKDSRAW PWNRTVDGRV APMMAGVH