| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_45040 |
|---|
| Symbol | |
|---|
| ID | 7199921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 31748 |
|---|
| End bp | 32260 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 136 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179124 |
|---|
| Protein GI | 219116659 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATTTGTTCTC TGTTCGAACC ATGGTACGCT CCCTCTTTTT CCTTCCCTGC AGCTTCATTG
CATGCTATGC CTTAGGCTTG GTCCCCCCGG TCTTTATTCG TCGGGTTCGA GCTACGACGC
AGTTATACGG CTTGTTCGAC TTTAACCCTT TCAAAGGGTC TGGCTCGGGT GGTAACCAAG
ACTTTCTTGA CGAGCAATGG GAAGCCCAAC AAGCAATATT ACGCGCGCGA CAAGGGCAGT
TCACCAAGGA AGATCTCCAG AAGAAGTACA AACCTCAGCC CAAGGAAGAT TCCGCTGATA
CTGAAGGTGT GCCTACTCCG TCGAAAAATC GCGGTGAAAG CAGCTCCTTC TTTGCTGAGG
TAAAAGAACC TCCCGTTCCA CAAAAAGTTG GTAGCCCTTT TGATATGAAA TTTCCCTGGG
ACAAGAAGTA GAAGCACACG AGATTATTAT CGTCGCAAGG TCACAATGCG ATGATTGTAA
CATTAGTAAA CTATTAGGTT TTCGTCAGAA ATT
|
|---|
| Protein sequence | MVRSLFFLPC SFIACYALGL VPPVFIRRVR ATTQLYGLFD FNPFKGSGSG GNQDFLDEQW
EAQQAILRAR QGQFTKEDLQ KKYKPQPKED SADTEGVPTP SKNRGESSSF FAEVKEPPVP
QKVGSPFDMK FPWDKK
|
|---|
| |