Gene PHATRDRAFT_35058 details

Gene Information

• Locus tag: PHATRDRAFT_35058
• ID: 7199996
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 976209
• End bp: 978227
• Gene Length: 2019 bp
• Protein Length: 672 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002179330
• Protein GI: 219117071

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGATAG AATCACTGGC GGAAGAATCG TCTTCCGTGT CAGTGACTGA TTTGCGCATC 
GTTTGCTTGA TTCCTTCCGC CACGGATATT TGCGTCGCTC TCGGATTGCA GGCTGCCATT 
GTCGCCGTCA CGCACGAATG TGATACAAAC CTTTGGTCGC GAGCGTCGTC GCGTACGGCA 
GTCAAGATCA TTACAAGAGA CGGGGTGAAC GGGAACGAGA CGTCGCAGGG TGCCATACAC 
GATCAAGTTG TGGCGAGCTG TCGGGCAAAA GATGAGGCCG TCGGTGATGG GGACATTCCC 
GCACTGGCGG ACGTGCCTTC CTTGTATCCC ATTTGGGAGG ACGAATTCCG CGAGGCTCTA 
CAGCTCAACG ACGTTCACGA CAGTAGTAAG CGCCTTGTGA TTACCCAGGA CCTGTGTGAA 
GTGTGTGCTC CCTCGTCCGA AACCGTTCGT CGGCTTGTGG GCAAGGATGC CTCACAGCCG 
CCACCGCCAC ACGAGGTTCA CGTTGTGTCC CTCACGCCAC AATCGCTGTG GGACGTTGCC 
GCTAATATTC TCACCGTCGG CCATGCCTGC GGGGTCCCAC GACGTGCCAA AATCGTTCAC 
GATGCGTTTC TGAGTAATTT ACAGACACTG GAAACGACCG TTACCGAAGT TCGTTCCCAT 
GATGGTGCAC CCAAGCTCTT CCTATTGGAA TGGTTGGATC CACCCTTTGA CGGTGGCCAT 
TGGATTTTGG ATATGATGCA GTTCGCCGGC GTGCAACCCG CCCAACACAA GCACACCCAG 
AAATCGACAT CGACGACCTG GGCTCAAGTC CGTCAGGCCG ATGCCGATGT GATTCTGGTC 
GCCTGTTGCG GTTTTGGTCT GGAACGGAAC GTTCGTGATA CTTTCGGTGC ACGCAACCAG 
TTGCAACAAC TGCGTGCCGC TCGCAATCGT CGCATCTACG CCACCAACGG TGACCACTAC 
TTTGCCCGTC CCGGTCCTAA ACTACTGCAT GGTGCAATCA TAATGGCGTT GACAGCTTAC 
GCGGATCAGC CGGAGGTGGT GCAAGCGATT CAGGCTTTGG ACTTTGTCGA CGCGGAACTG 
GGTGGATATC AAATGGTCGA TGTTCTGGAC CCTACCATTG TACAAGCAAA CAACGATGTT 
CCCGACATGG AAGACTTTGA CCGCTTGCAC CGCGAAGCCT GCAGCGCCGG TTCGTTATCC 
TACCCGGACC CCGTTACGGG CTATAAGGTC TTCACCGAGC TCGCCCACCG TCAACGTGGC 
AAATGCTGTG GTTCGGGCTG TCGGCACTGC CCGTACAATC ACGAAAACGT CAAGAATAAG 
GCGGGGAAAA TACAACAGCC GGCCATGCTC ACCGCTGGCG ACCAGACGGG TCCACTGGCA 
CTGTCCAACG GAAACCTGCA CGTGCTGTTC TTTAGTGGCG GTAAGGATTC CTTCCTGGCT 
ATTCGGGCAT TGACTCGACA AGCCAAACAG ACTGCCCCGT TTGGGTTAGC CCTGTTAACC 
ACGTTTGATG CCACGTCGCG TATTATTGCG CATCAGGATA TGCCGATTGA TACCGTTGTG 
GAACAAGCGA CACATCTGGG TTTGGCATTG ATTGGTGTCC CCATACACCG GGGGAGTGCC 
GAAGGATACG TGACACGAGT TCGCAAGGGG TTAGAGGTAT TGCAGAGCAG CGTTAAACCC 
CCAAGCAAGG TCACAACCTT GGCCTTTGGC GATTTGCATT TGGAAAATCT GGTGGAATGG 
CGAAATTCCC AAATCGGATC GCTCGGCTAT AAATTGCAAT ATCCCGTATT CCAGACCGAG 
TACGAAATAC TGTGGCAGGA TTTGGAAGCG TCCAAGGTAC CGTGTGTCGT ATCGTCATCA 
ACGGTTGATC ACATCCGTGT TGGGGATGTC TACAGCCGAG AGTTTGCCCA ACGGTTACCG 
GAATGCGTCG ATCGCTTCGG TGAGAATGGT GAATTTCACA CAATCGCACA AGTTTGGGAA 
GTAGACCGCA TCACGGCTTT GGGATTTATA GATAGTTAA 

 

Protein sequence

MSIESLAEES SSVSVTDLRI VCLIPSATDI CVALGLQAAI VAVTHECDTN LWSRASSRTA 
VKIITRDGVN GNETSQGAIH DQVVASCRAK DEAVGDGDIP ALADVPSLYP IWEDEFREAL 
QLNDVHDSSK RLVITQDLCE VCAPSSETVR RLVGKDASQP PPPHEVHVVS LTPQSLWDVA 
ANILTVGHAC GVPRRAKIVH DAFLSNLQTL ETTVTEVRSH DGAPKLFLLE WLDPPFDGGH 
WILDMMQFAG VQPAQHKHTQ KSTSTTWAQV RQADADVILV ACCGFGLERN VRDTFGARNQ 
LQQLRAARNR RIYATNGDHY FARPGPKLLH GAIIMALTAY ADQPEVVQAI QALDFVDAEL 
GGYQMVDVLD PTIVQANNDV PDMEDFDRLH REACSAGSLS YPDPVTGYKV FTELAHRQRG 
KCCGSGCRHC PYNHENVKNK AGKIQQPAML TAGDQTGPLA LSNGNLHVLF FSGGKDSFLA 
IRALTRQAKQ TAPFGLALLT TFDATSRIIA HQDMPIDTVV EQATHLGLAL IGVPIHRGSA 
EGYVTRVRKG LEVLQSSVKP PSKVTTLAFG DLHLENLVEW RNSQIGSLGY KLQYPVFQTE 
YEILWQDLEA SKVPCVVSSS TVDHIRVGDV YSREFAQRLP ECVDRFGENG EFHTIAQVWE 
VDRITALGFI DS