| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35055 |
|---|
| Symbol | |
|---|
| ID | 7199995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 968830 |
|---|
| End bp | 971321 |
|---|
| Gene Length | 2492 bp |
|---|
| Protein Length | 740 aa |
|---|
| Translation table | |
|---|
| GC content | 59% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179328 |
|---|
| Protein GI | 219117067 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAGAG CGAGTCCGAG ATTGCAAGAA CCGTCGCCAT CTGCGGCGTC CGTGTCGGCT
CTGGCGGCTC CGGCTCCATG GTTTGGGCTG CATCCTGCCG GACCCACCAC GCGTACCAGC
CGCGCGGCGG CCTTGTCCTG CCTCGGACGC CTCTGTAGTG TCGTCGTGCT TGCCATATTA
GCTAGTAGTC ACGTACATCG TGTTTGGCAG CAGTATCCGG AGTGGCTTCC CACGTCGTCG
CGCAATGCCA CTGCGTCCAT CACTCTGGAC TCCGCATCAA TTCACGCACA CACCGGACTC
GTCCAGGAGT CGCACCACCC GAACGACGGA TTCCAGCGCG AATCGGTCTC GTCGTCGGTT
TTGGGCGATG CGTACGACGA ACAAGGTCGG GCGGGGTACG TGGCGGATCC CACCGCCTTG
CGGCGCGAGC GGCAACGGTT TCGACACGCG AGGACCCGGG AGGCGTCGGA ATCCGGGGCA
ACGGAACCAT CAATCGAAGA TTCGTCGGAT TATTGGCACA TTCTGGAAAA TTTCGTACCG
TTCCGAGCAG ACCAGGATCC GTTGCTCAAC TCGCGGAATC ATCCGTTGCG TGCCAACGTA
TCTTCCGATT ATGTGTGTGC GTTCCCCCCG GGTCGGGGAC TCGAAGAGGA AGGTGGGTAC
AAGCTCTTGA CGGAAAAGAT ACGACTCCAG ACCGTGCACC GTCGAAACAC TACCACCACG
CCGCGACTGT TGTGTGCCGT GTACACGTAC CCACGAATGC GAGATTTGGC TCGAGCGTCG
GCATTGTCGT GGGGATACCA ATGCGATGGT TTCTTGGCCT TTACGACGGA AACGATTCCG
TCCTTGGGCT TTGTCCATCT ATCCCACGCT GGCAAAGAGT CCTACCGGAA CATGTGGCAG
AAGACGCGGT CCATCTGGTC CTACATTGCT CGACACTACG CGGACGATTA CGACTACTTT
CATTTGGGTG GGGACGACAT GTACGTGCTG GTGCCGAATT TGCGAGCCTT TTGGCAAGAC
GAGATTATCC CAGACAGCAT GGGTACTGGT TCCGGTGCCG GCCAGGACCA AGCCATCTTT
ACGGGTCAAC AAGTAGTGTT GCGTGAGGGG CAGCGTCCCT ACGTCTCGGG TGGTCCGGGA
TACACAATGA ATCGTGCCGC CTTGCATCGT TTGGTGAACG AGGCCTTGCC GGAGTGCGAG
GTGGATACGA TTGCCTCGCA CGAAGACCGT CTAGTCTCAC AGTGTTTCGA CCGCATCGGG
ATAAAACCGT GGGACAGTCG TGATGTACCC ACCGGATCCC AGCGCTACCA CGACTGCTCA
CCACACCACT TGTACACGTT CCGTGCGGTG ACTTCGTCCG GTCGCGGCCG CGGTTCGTTC
CACGCGCGTG CGGCCGCCTA CTGGGCGAGC CAGCCGCGGT TGGGTTCGAT GGTCGGAACC
AACGAGACGA CGGGTCCACG GTACGGCTTG GCAGCGGCCG CCACCCACAG TATTTCCTTT
CACGACGTGC ACAATCCGCT GTACGTGGCA CGCATGTACG CGTTGCTGCA TCCCGGGAGT
TGTCCGTCCG CGACGGCGCT CGGCCGTGGA CTCGCGCAGA GTCACGGGCA TCGTGCGGCG
GGTTTCTAGA GGACGCTTCC AGAGGAAAGT GTCTGTGTGT TTAATGTGTA AGTGTGTGTA
TAATTAGGTG GTGGTGTCGA TACATGTATG TATAGGGGGG TACTACAGAG ATCGAGAACG
AACGGTTGGG GTTGTACGTT TGGAATTAAC AACGGTAGTA TTAGTCTAGA GGAGTACCTA
TTTTGTAGTA TGGTTGGGCC GGTTCTCTCT CTCGGTAGCT CGGGCGCGAG GGTGGGGGTT
CCATGCGATC GTCTCCTTCC CTGGAGCCCG TAGGGAGGGT TGGCGCGTCG GCCGAAAATC
GAGTCTCGCA CGGCGCGCGG CCCAATGACG GCCGGCGTAC ACGACAGACC GGTTTCGGCC
TACCGCGAGA CATACGCGCC ATCTCGGCAC ACCGCGCGCG TACCAACAAA CCCTCACACC
CCAACTGACA AAACGAACAG GGCAGCACTC TCATATACCA CGACAACACT ATCGAGACCT
GACAGGGAAC ACGGTCGGTA CGAATCCCAA GATATATACA CACACTAGAC AAACACTTGC
TTGCAGAAAC ACTTTACTAC AAGAGAAAAG GGATGAATGC GTTGGAGGAG AGGCTTCCAA
CGTCGGGGAA CGCATCGGAC GACATGGACG ACGCGTCGCT GGACCGCGGC ATTCCGGGAA
CGGAGGACGA GGACGCGTCG GTGGCACGAG CTCGAGCACA CGTTGCCGTC CTCGATGAAC
CTACGGGTGA TCGAGTCCCA CGCGATACGA CGGGAGATCA AGCCGTCTTG GGAGCAGCTG
CGGCGCAGGA CGGGGTAACG GCCTTTGCCG TGACGGATGA AAGTGGACAA CTCGTCCTCG
CACGTTTTCA ACAGTTTCTC GGACAATTGT GA
|
|---|
| Protein sequence | MRRASPRLQE PSPSAASVSA LAAPAPWFGL HPAGPTTRTS RAAALSCLGR LCSVVVLAIL
ASSHVHRVWQ QYPEWLPTSS RNATASITLD SASIHAHTGL VQESHHPNDG FQRESVSSSV
LGDAYDEQGR AGYVADPTAL RRERQRFRHA RTREASESGA TEPSIEDSSD YWHILENFVP
FRADQDPLLN SRNHPLRANV SSDYVCAFPP GRGLEEEGGY KLLTEKIRLQ TVHRRNTTTT
PRLLCAVYTY PRMRDLARAS ALSWGYQCDG FLAFTTETIP SLGFVHLSHA GKESYRNMWQ
KTRSIWSYIA RHYADDYDYF HLGGDDMYVL VPNLRAFWQD EIIPDSMGTG SGAGQDQAIF
TGQQVVLREG QRPYVSGGPG YTMNRAALHR LVNEALPECE VDTIASHEDR LVSQCFDRIG
IKPWDSRDVP TGSQRYHDCS PHHLYTFRAV TSSGRGRGSF HARAAAYWAS QPRLGSMVGT
NETTGPRYGL AAAATHSISF HDVHNPLYVA RMYALLHPGS CPSATALGRG LAQSHGHRAA
GGYYRDRERT VGVLGREGGG SMRSSPSLEP VGRVGASAEN RVSHGARPND GRRTRQTGFG
LPRDIRAISA HRARQHSHIP RQHYRDLTGN TVETLYYKRK GMNALEERLP TSGNASDDMD
DASLDRGIPG TEDEDASVAR ARAHVAVLDE PTGDRVPRDT TGDQAVLGAA AAQDGVTAFA
VTDESGQLVL ARFQQFLGQL
|
|---|
| |