| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_35054 |
|---|
| Symbol | |
|---|
| ID | 7199994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 965847 |
|---|
| End bp | 968336 |
|---|
| Gene Length | 2490 bp |
|---|
| Protein Length | 621 aa |
|---|
| Translation table | |
|---|
| GC content | 50% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179549 |
|---|
| Protein GI | 219117509 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTG TCGAAATTGG ATACTGTACG TTTCCACAAA AAGTCACATC ACATATATCA
CGCGTGATGT GACATTGCCC TCGCGACGAA TGTTCGCACC GTCGTCGGAG AGACGACACG
GCGACAACGT GTGAGTCCTT ACAGGTCGGT GCCTCGTTTC CGCGAGAAAG GTCCAAACGC
ATCTCTCGCG CAGTGGTCCT TCCTATTCGA GCGTCGTCCT TTTGGGGTTT CCCTCACACT
GTCCCTACGC GTTCATTCTC AGTTTGACTG GCTTTTGGCT ACTGCTACTA CTGCTGCTGC
TACAAAGGCC CGTTGGTCGT CAAAGACAAG CGGGTGTTAC GAGTCGACAG TCGTGTAGAC
CACTTCGGTG CTACAGTTAG TCAAGTGCGC AACGAATCCG GAAGCCAAAG CAAAGATACC
AGCGGATCCG TTGTTTGTTT CTTAGTGGCA CGTTTGGAAC GAGTTCTTGA TACGTATTGT
TTGTTTCGAG CCAACAGAGT TTTTGCAGAG AACTGTCGCA ATCAATCTGA AAAAGCAACC
AATTGTGTCT TTAGCTCGGT TTTGCTTGCC GACAGTTGCG ACAGTCTTTC TCCAACAAAC
AACTTGTCCA GAGAGTTTTC GAAATCACTG TTGGTATTCT GAGCTGTCGA CCGTCGATTG
ACACACTACA CCCAGTAAAC CTTTGGGCCG ACACTTTTCG CAAGTATCTA CCGCGAATTT
TGTTGTTTGT AACGTTTACA GCACCAGTTG CGAGGGCACG GACATTCACA CATCGCTCGG
CGCCTATGCA GTTTCAATAC AATTCAGATT ACCCCGGTGG TGGTCCGGAC GATAACCGCC
TCTTTTCTAC CGCCAAAGCC GCAGCAGACG CCGCAAATCC TCCCGATTTT CCTCCGGCAC
ATCCCATTCC GTGTGCCCGG ATCACTACCC GTGTGTTTCA TCCCAACCGA AATCAAGTTG
CTACCGTGCA AAACGTTCTG GTACGGACCG TCCTCCAAAA TCCATTACAT TCCTCACCAG
CGGTGGCACT ATACAATGCC GCCGAAAACC ACGAGGACTC TTCCATGAGC AGTAGTGACG
GGTTTTCCGA CAGCAACGAT GACGACAGTA TGCTGTTGGA CGACGGGTCT CGGGGTGCCT
CGGGGCCGAT TGGCTTTCCG GGCATCGCTC CGGCATCGGC TTCCACCAGA ACGGTTCAAC
AACAACCCAA TGGCGACGAC GATATGGACA AGGATGGTGA CGATCGCGCA TACTGGATAC
AACGGACCAT TCGTGATGCG ATTTACGGGC ACGTGTTCAT GGCGGTGGTG CTGCGGAGAC
GAGTACCCAG TCAAGCCGGC AACGACAATG CCGAATGGGA AGTTACCGCA CAACACTGTG
CCGTTAAGGA AATGAGCTGG CAGCATATTC GGAAAGAACG CGATCGCTTG GCCGAAGACC
CCATAAAGGA AGTCTCTGCT ATGCAATATC TGGTATCCTG GCATCGATCC GAACGGAAAG
AATGTGAGCA ACAAGTATTG TCCTCCGCAT CTACAGAACA TCCTCGAGAC GGCGTCTCTC
GATCCGTACG AGCCATGGTG GCAACCAACA TTATGATGCC ACTGGATTTG CTATCGGATG
ATCGGAATTT ATACAGCGTC ATGCCCTACT GTAATGGTGG CGAGCTTTTT GAGCGACTCG
ATATGAATGA ACGATTTAGT GAACCGGAAG CGCGGTATTG GATGAATCAA GTTTTGAATG
TACGTATCAA TACAAATGGA GTCATTCGGA AGTTGCCCAT GAAGCACAAT TCTGACCGTG
TTCTTGTTTT AAACTTAGGG TATTGAAACT CTACAGAATG CTGGAATATG CCATCGTGAC
ATGAGCTTAG AGAACCTTTT GGTACACGAA AATGGTGCGC TGATTATTGA TTTGGGTATG
TGTTTGCGGG TCCCTGTGCA GAAGGAGCAT GGAAGCGACA CTCCGGAGGA ACAGGCACAA
TTTCTGTCGC AGTCGTTTGA CACGATGAAT ATGAACGGAA ACAACTCAAC GGCGCTATTA
ACGCCCACAT CATCCTTGAC AACTACCACC ACAACTATTC GCGGAGGTGC AACCATATGC
CGGAAGCAGC CGCGCCGATT GATTACTCCG CAAGGGACCT GCGGTAAATG GATATATATG
TCACCGGAAA TATATAAGAA CGCTGCACCT TTTGATGGCT TTGCCGTGGA TATGTGGGCT
GCAGGAGTGA TTTTATTTCT CATGCTGACA GGATTTCCGC CATGGGAGCG CGCGTGCCAG
ACGGACGAAC GCTTCAAATA TATGACTGCT GGGTATCTGG TTCAGATGCT GACGGAGTGG
GACATTGGCC TTAGTCCGGA CGCGATGGAT TTACTGCAGC GAATGTTATT TCTAGATCCT
AAAGACCGCT TGAGCTTGGA GCAAGTGCGG GCACATCCGT GGATGGTCAA TGGACCGAGT
CAACCGCCAG CGCCACTAGC CGAGTTTTGA
|
|---|
| Protein sequence | MKRVEIGYCP LVVKDKRVLR VDSRVDHFGA TVSQVRNESG SQSKDTSGSV VCFLVARLER
VLDTYSPVAR ARTFTHRSAP MQFQYNSDYP GGGPDDNRLF STAKAAADAA NPPDFPPAHP
IPCARITTRV FHPNRNQVAT VQNVLVRTVL QNPLHSSPAV ALYNAAENHE DSSMSSSDGF
SDSNDDDSML LDDGSRGASG PIGFPGIAPA SASTRTVQQQ PNGDDDMDKD GDDRAYWIQR
TIRDAIYGHV FMAVVLRRRV PSQAGNDNAE WEVTAQHCAV KEMSWQHIRK ERDRLAEDPI
KEVSAMQYLV SWHRSERKEC EQQVLSSAST EHPRDGVSRS VRAMVATNIM MPLDLLSDDR
NLYSVMPYCN GGELFERLDM NERFSEPEAR YWMNQVLNGI ETLQNAGICH RDMSLENLLV
HENGALIIDL GMCLRVPVQK EHGSDTPEEQ AQFLSQSFDT MNMNGNNSTA LLTPTSSLTT
TTTTIRGGAT ICRKQPRRLI TPQGTCGKWI YMSPEIYKNA APFDGFAVDM WAAGVILFLM
LTGFPPWERA CQTDERFKYM TAGYLVQMLT EWDIGLSPDA MDLLQRMLFL DPKDRLSLEQ
VRAHPWMVNG PSQPPAPLAE F
|
|---|
| |