Gene PHATRDRAFT_35002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_35002 
Symbol 
ID7200023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp845215 
End bp846123 
Gene Length909 bp 
Protein Length302 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179520 
Protein GI219117451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.353104 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTTGG ATCAGCTGTT CACGTGTACA GACTACCAAA CATCGCTAAT TCGAATACCT 
TCTGCCACCA ATTCTCGCGA AGGAGCCGAC GACGACACCC AGACGCTGTC CGAAGTAGAA
ACTTTGGTGA CCCCCTCGGA TGCCCAGCCC TTCATCGAGA TCGAGCTCTC GTATTCGGCA
GCGGCGAGTA CGGATTACGA CTTGACGGGA CAAGTCCTTT GGCCTGTCTC CGTCTTGCTG
GGTCACTATT TGGCCTCTAC TTCGGGTAGT CACCGGATTC GTGGTCGATC TGTTGTAGAG
CTAGGTGCCG GAACGGGGCT ACCCGGCTTG GTGGCAGCCA AGACTGGCGC CGCCAAGGTT
GCCGTTACGG ACGGCAACCC TGTGGTACTG GATCTCTTGT CGCAAAACGT GTCCACACTC
CGACGCCCAC ACGAATCAAG CTCGTGCGAA CTCGCGGCGC AACAATGTGT CTGGGGCGAC
CGAACGCATT GTCATCGCCT GCTACGGAAA ATGGACGACG TTGTGGATGT CGTGGTCGCC
GCCGATGTCG TACAATGGCC CGCCGTCGTC GAACCCTTGC TGCATACCGT CAAAGCGTTC
TTATGGAAGT CGACCGCACC CGAACCGGTC ATGTTGCTGG GCATTGTCAA CCGCGCCGCG
TCAACCTACG AAATGTTTTT TTCACTGGCG GAAACGTTAG GCTTTTCTAC TCGGTCTGTG
CCCTACGAGG AATTTCTTGC CAACGGTGCG CTGCCGAAAT CCTGTCGCGA GTTTGGAGGC
CGCCAAACCG AAATTGTGGA GGCGGTTTTG ACGGATCGCA GTGAGCTTCC AATCCTTTTG
CGGGAAGACA ATGCTATCGA TTGTACGATA GGCGCTACTT TCGAGAACAC GACCTTTCTT
CCTTGCTAA
 
Protein sequence
MDLDQLFTCT DYQTSLIRIP SATNSREGAD DDTQTLSEVE TLVTPSDAQP FIEIELSYSA 
AASTDYDLTG QVLWPVSVLL GHYLASTSGS HRIRGRSVVE LGAGTGLPGL VAAKTGAAKV
AVTDGNPVVL DLLSQNVSTL RRPHESSSCE LAAQQCVWGD RTHCHRLLRK MDDVVDVVVA
ADVVQWPAVV EPLLHTVKAF LWKSTAPEPV MLLGIVNRAA STYEMFFSLA ETLGFSTRSV
PYEEFLANGA LPKSCREFGG RQTEIVEAVL TDRSELPILL REDNAIDCTI GATFENTTFL
PC