Gene PHATRDRAFT_34964 details

Gene Information

• Locus tag: PHATRDRAFT_34964
• ID: 7199949
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 767088
• End bp: 769052
• Gene Length: 1965 bp
• Protein Length: 654 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002179287
• Protein GI: 219116985

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACCA TGGCCCTCGT TGTGGGCGTT CTCGCTCTAT CTCTTCGTAT GGGTGATTCC 
TTTTCGTCAC AATGTACAAA ATTACCACGG AGAACGGCAC TACCGTCTCG GCGTACGAAT 
CGTTACGTTT TATGGAGCAG CAGTAGCCGT AGGAGTACAG TTGCACCACC GGATCTCGAT 
ACGGGTGCGA ATCCGATTCC GGACGCCGAC GTAATTACAT CCACCGACGC TGTGGTGGTA 
GGCGGAGGTC CCACTGGACT CTTGACAGCT ATCATGTTGG CACAAAAGTA CCCCGACCGA 
ACCCTCCAAC TCTACGATCG TTTGGCGGAA CCGCCGTCTC CAGACGACGA CACCGTCTGG 
AACGATGTGG CCAAGTTTTA TTTGATCGGC TTAGGAGCAC GTGGACAATA CGCCTTGCAA 
ACCTTTGGAG TATGGGACGA AGTTGAGCAA CGCTGCGTAG CGGTCGTCGG ACGCAAGGAT 
TGGCCGCCAG ACTCGGAAGA AGGTGTGGAA CGGATCTTTA CCAAAGAAGA CAAGAAGGTC 
GCAACGCAAG TCTTGCCTCG TGACAAACTA GTCGGTGTCT TGCATCAGCA TATTCGGGAA 
AATTATGATG GAAAAATATT CTTAAATTAT GGCTACGAAG TGCATCCGGT AGATTTTGAA 
TTTCGTGGCG GTAGTCAAGT CCTACTGCAG ATTGTCCAAT GTTCCGAGAC CGTCGTACGG 
CTGAATCCTT CGGCTGTACG AACAGCTATA GATAAACAGG ATGAGATGCT ATGTGATACC 
CAAGGTGGCA AGTTTGTGGC GTCAGATTTG GTGATTGCTG CGGATGGTAC GGTTCGTACC 
ATTGCCAATG CCATGGAACG TCAAGATCAG CAGCGATTCC GTGCAATGAA TCCACTCCAA 
AGGCTAAGGG CTGGCCGACC TTTTCGCGTG AAGCGATACC TTGATGACAA TCAGCGTATA 
TATAAAACCA TTCCGATGAA AATCCCCAAG GATTGGCGCC CTGACCTAAA CTACTCGGCT 
CGTACGAAAG AGGGACGAAT CAATTACGAT GCTCTACCGG CCAACGAAAA TGGGGAATAC 
TGCGGGGTGT TGCTGCTCAA AAAAGGAGAC CCAATGGCGC AGGCGGACAC CAGTCCAACC 
GAGCTCCGCC AATTAATGGA CGACGTTCTT CCACAATTTA GTGCTCTTCT GGATGACGAG 
GTTGTCGCTG CGGTTGCCCA AAAGCCTGTT TCGTATCTAC CGGGCTTTCG GTACGCCGGT 
CCGCGTCTTA ACCAAGGCGA CCGTTGTGTA CTTCTCGGCG ATTGCGCCCA TACTGTCAAG 
CCGTACTTTG GACTCGGTGC CAATTCGGCC TTGGAGGATG TTAAGATCAT GAGCGAGATT 
CTCGATGCCA CGGAACATGA TATATCGGCG GCGGTCCGTG AGTTTTCACG ACGCCGGGCT 
CCCGAATCGG AAAGCCTAGT GCGCATCTCC CGTGACCTCG ATCGTCCCGG AAAGATTGGA 
TTCGTCACGT TTATTCTGCC TCTGATCCTG GACTCTATCT TTAGCAAAGC CATGCCGAAA 
TTGTTCCAAC CTAATATCAT CACCATGCTG CAAAAAGAAA ACTGGACTTT TCGACAGGTA 
GCATCACGAA AACGGCTGGA TCGGCTAGGA CAGCTTTCCA TCATTGCGGC AGGCTTAACA 
GGGATGGGTT TCGTTGCGCG AGTGTTAGTT CGTTCGGTGG CAAGAATGAT GGGCAAGAGT 
ACGACAAAGG TTGCAATGGG ACTTATCGGA GCCGCCTTTG GAATTGGGCT GCTCCGACGG 
TTCGCTGGGC TAGTGGCACC AGGATCAGCA CCAGCCGACG TTGTCACCAA AATGGCTACA 
AACAAAAAAT CCAAGGAGCA AAGCGATAGC CCACTCAGCA GTCGACAATC ATTTCTGACA 
CCTCGTCTTG GCTTTAGCAA CAAAGGAGAA AGGAAGTCCA AGTAG 

 

Protein sequence

MTTMALVVGV LALSLRMGDS FSSQCTKLPR RTALPSRRTN RYVLWSSSSR RSTVAPPDLD 
TGANPIPDAD VITSTDAVVV GGGPTGLLTA IMLAQKYPDR TLQLYDRLAE PPSPDDDTVW 
NDVAKFYLIG LGARGQYALQ TFGVWDEVEQ RCVAVVGRKD WPPDSEEGVE RIFTKEDKKV 
ATQVLPRDKL VGVLHQHIRE NYDGKIFLNY GYEVHPVDFE FRGGSQVLLQ IVQCSETVVR 
LNPSAVRTAI DKQDEMLCDT QGGKFVASDL VIAADGTVRT IANAMERQDQ QRFRAMNPLQ 
RLRAGRPFRV KRYLDDNQRI YKTIPMKIPK DWRPDLNYSA RTKEGRINYD ALPANENGEY 
CGVLLLKKGD PMAQADTSPT ELRQLMDDVL PQFSALLDDE VVAAVAQKPV SYLPGFRYAG 
PRLNQGDRCV LLGDCAHTVK PYFGLGANSA LEDVKIMSEI LDATEHDISA AVREFSRRRA 
PESESLVRIS RDLDRPGKIG FVTFILPLIL DSIFSKAMPK LFQPNIITML QKENWTFRQV 
ASRKRLDRLG QLSIIAAGLT GMGFVARVLV RSVARMMGKS TTKVAMGLIG AAFGIGLLRR 
FAGLVAPGSA PADVVTKMAT NKKSKEQSDS PLSSRQSFLT PRLGFSNKGE RKSK