Gene PHATRDRAFT_34956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34956 
SymboldsCYC2 
ID7199945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp755907 
End bp756956 
Gene Length1050 bp 
Protein Length349 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179283 
Protein GI219116977 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.349779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC AGCAACATTC CCAGCAAGAA GACCAAATTT TCGACCTGTT GGGGGTCATG 
ATTCGTCAAG AACGTACGCG ATATCGGGTT GTCAACTACC TCCAACGCGA GATGGTGTAC
GAATGCCAGC AGCAGCAATC CCAGTATGTG GTTGAAGCGT GCGCCAGTAT CACTAACAAC
CAATACGCCG TCAAAAAATC CCAATCTTCG ACCTCTCTGC GAGACGTCCA AGGCGACGTT
GGCAATTCCA GCCCCCGATC GGCGCGAACG ACTTCGGGCC CCTTGAGGAT TGAATCTACA
GCGTCCCCAG TTTCCGACCG AGCCGTCCAG TTTTCTTTCT GGCGACAGCA AATGTTCGAC
TGGGCTTGTA TGGTGACGGA CTGTTTCAGT ATCGATCGGG AAGTTGTCGC GGCTAGTTTC
AATCTTTTGG ATCGATACGT TGCCCGCGAA CTATCATCGC ACTCGTCATC AACTTGTCCG
GATGATTACT CGCCGGCGTT GGTGTCCCCA ATTTCGCGCG AAGACTTTCA ACTATTCAGT
ATGACGTGTC TGTACATTAC CGTGAAGATT CTCGAACCCT ATCCGCGCAA GCTCAGTTTG
GAGGCTTTGG TGGACATGTC GCGAGGATTC TACACACCGG ACGATATTGC CGTTACCGAA
CGCGAAATAA TGACTGCTCT TTCCTGGCAC TTGCATCCTC CAACCGCTAT TGGCTTTTCA
CGAATGTACT GGTCTCTGCT GGCGTCTACG GACGCGACTG AACCTAGCTC TGCGGTCCAA
ACGACCTGTG CGACGCTGAC GGAACTCGCG GTCGCTAACG CTGAATTCAT CGACAGTCCG
CCTTCACTCG TGGGATTGGC TGCCACCGTG CTCGCCTACC GACTGCCGGC CAATACCAAT
GCCCATGATA CTGATCAGAA TGGATGTTCC GCTGCGGTTC ACGAAGCGCA GGCTCGCTTG
CTGCTCGCCA AACTCGCTCC TCTGGTGGAA CCCCAGGCAC AACAGTTTCA TGCCATATAC
ACGCAACTGG AAGCTTTGTA TGGAAATTGA
 
Protein sequence
MMKQQHSQQE DQIFDLLGVM IRQERTRYRV VNYLQREMVY ECQQQQSQYV VEACASITNN 
QYAVKKSQSS TSLRDVQGDV GNSSPRSART TSGPLRIEST ASPVSDRAVQ FSFWRQQMFD
WACMVTDCFS IDREVVAASF NLLDRYVARE LSSHSSSTCP DDYSPALVSP ISREDFQLFS
MTCLYITVKI LEPYPRKLSL EALVDMSRGF YTPDDIAVTE REIMTALSWH LHPPTAIGFS
RMYWSLLAST DATEPSSAVQ TTCATLTELA VANAEFIDSP PSLVGLAATV LAYRLPANTN
AHDTDQNGCS AAVHEAQARL LLAKLAPLVE PQAQQFHAIY TQLEALYGN