Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34949 |
Symbol | |
ID | 7199940 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 741068 |
End bp | 742200 |
Gene Length | 1133 bp |
Protein Length | 318 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179280 |
Protein GI | 219116971 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGACTA GCGAGGGCCA GCCCCTTGCC GTGGTAAGGT TACACGCCGC ATTTTACTGC TAACTTTAAC CAAAAGATGA GAATACTGTG CCTTTTAGCT CTGGTAGGGT CAACCTATGC TTGGTTCTTA GACAGCAAAT CTCCTTCATC GAAGCGAGCA ATTCCCAACA ACGTTAAATT GGTGGTGCTT CCCGGATTTG GCAATAATTC GAACGACTAC TTTTTGCCCG AAGCTCCCCA GGGATCTTTG GTTCGGTCTT TGCAAAACCG TGGCTGGCGA GATGATCAGA TTCGCGTTTT GCCGATGGAA CGTTTGGACT GGCTACAGGT TTTCGTGAAT GGTCTCTTTG ACCTTCGCTT TTGGACGTCC AATATGGCGG CGACTTGTCC CTCCTTTCGG TGGTATCTTA AGTGCGTGGC TGGCGAAATT GCAGAGATTT GTGAGGAAAG CTCGGACACC AAAGTGGTCC TTGTTTGTCA TTCGGCGGGG GGATGGCTGG CCCGAGCGGC GCTGGGATAC TTTAGTCAGG CGCAAGCTGA TGAGCAAGAC GTTCCGCGCA TTGAGTTGGA ACGTGTGCTG GGTATGGTCA CACTCGGAGC TCCGCATATT CCACCGCCTC CTGAAGTGAT GGATATGACA CGTGGTGCAC TGCGTATTAC CAACGAAGAT TTTCCCGGGG CATACCATAT TGACGATGGT CTCTTCTATA TTACGGTTGT TGGCAACGCC ATTGCAGGCA TCAAAGATCA GCGGAGATCC CCGTTCGAAC GCACTACACC AACTGGATTG GCTTTTAACT CGTATGAGGC CGTCTGCGGT GCCGGTACAA GTATGGGCGA CGGCCTTATC CCTCGAATGT CAGCACATTT GGATGATGCT ATTCAAATCA ATTTGGATGG AGTTTTCCAT TCGATTAACG CACCGGTAAG AGACGTACAA GCAGCGTTGC TCATACCTAC ACCACATAGT GGCAAAGTGA CTCACTTTGC TGTTACACTC ACAGGATAAA TGGTACGGGT CGGATAGTCT ACTTGATAGA TGGCATGACA CAATGCTGGA ACAAATATAT TCGAGCCGGA ATATGAGTGT GAGGACGCCA AATCGTGATT TTGGCAACGT TGTGTCAAGA TAG
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Protein sequence | MWTSEGQPLA VVSKSPSSKR AIPNNVKLVV LPGFGNNSND YFLPEAPQGS LVRSLQNRGW RDDQIRVLPM ERLDWLQVFV NGLFDLRFWT SNMAATCPSF RWYLKCVAGE IAEICEESSD TKVVLVCHSA GGWLARAALG YFSQAQADEQ DVPRIELERV LGMVTLGAPH IPPPPEVMDM TRGALRITNE DFPGAYHIDD GLFYITVVGN AIAGIKDQRR SPFERTTPTG LAFNSYEAVC GAGTSMGDGL IPRMSAHLDD AIQINLDGVF HSINAPDKWY GSDSLLDRWH DTMLEQIYSS RNMSVRTPNR DFGNVVSR
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