Gene PHATRDRAFT_34944 details

Gene Information

• Locus tag: PHATRDRAFT_34944
• ID: 7200147
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: -
• Start bp: 724826
• End bp: 728231
• Gene Length: 3406 bp
• Protein Length: 1094 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002179491
• Protein GI: 219117393

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTACCGG CCACCAGGCA AATGACTAGC GGAGCTGCTT ACTCGCATTT TTTGGATAAT 
GTATTTTCAC TTCCTCAAGG GCACCCAATC CGACTTAGTT TCGAACAACA AGGGTATAAT 
TCTGTTGATG ATCTCCTCAG TATTTTTGAG AACGAACTAG ATGCCCTTGG ATATGTGCCT 
CCAGCGAGTC CTGACACCCA TGAAGACCCT CAGTGGACCC CATTGCTCAT GGCGCACCGA 
CAGATCCTTC GTCATTTCCT GCGTTGGCAG GCATCACTTG AACGGCAAAA GGGAAGTCCT 
TTGGAAAATT CGGAGCTTGT TGCATTGACT AGTGGAGATT TCATTTTATA TCGACGCTCA 
GCACTCGGAC AAGTCTCTAA TGTTCCGGCC ACCATCAGTC CTTCTCTGAA CAACCAGTTA 
AGTACGTCCA CGAAAGCTCG ATCGGCAGTC GACGAATTTA AGCGAGGAGT CAAGCGTGAC 
AAGACCCACT ATCCTATCCT TAAGGATGAC CGATACTGGG ACAATTTCTA CCGGTCTTTC 
GTGGTCACCG CGGTATCCCA TAACGTCGAA AAGGTACTTG ACCCATCCTA TGCACCGACG 
GACCCCTCAG AGAAGTCTCT CTTTGAGGAA CAGAAGAAAT TTGTGTACTC TGCTTTGGAA 
CATACACTTC AGACAGATAT GGGGAAAAAC CTTGTTCGCG AACATAGTTT TGACTTCAAT 
GCCCAAGAAG TTTTCCGTAA GGTTGTCAAG CACTACACAG AGTCTGCCAG TGCCAAGATT 
GGGTCCTCCA ACACTTTGGC CTACCTCACT ACGGCAAAAT ATGGCACATC CTGGACAGGA 
ACGGCGGGGA AGGGTTCATC CTTCACTGGA AGAACCATCT TCGTATCTAC AATGATATGG 
TCCCTATGGC AGAGCAGTTG CCTAAACAGC TTTGCCTCAG TTTGCTTGAA AACGCTGTAC 
ACGACATCCC TGAACTCCGC CAGGTCAAGA TCACCGCTAC TTTAGACTTA GCTAAAGGAG 
GCACTCCCCT CAACTACGAA GGCTACCTGA GTCTATTGCT TGCATCTGCT TCTCTATACG 
ATAAAGGGAA CAACCTTTCC AATTCTCGTA GTGTCAAGAG CAAGCGTAGC GCCTTTCTGA 
CCGACCTCTC GTATGATCAA CCGGACTTCA CCGAAGACAA TGGAATTGAC TATGATATTG 
ATCTCTCTCC TGCAGTGATC TATGAGGCCA ATGCTCACAA CCGCAAAGTC AGTCCATCTG 
GCCACCGTAA TCGCGATCCG GCAACCAATC GAGAGCGTCC GTATATCCCT CGCGAGATGT 
GGAATCAGCT TTCAGATGAT GCCAAAGCCA TTCTCCAAGG CCTGTCCGCA CCCGACAAAG 
GCCCTACTCG ATCCGGTGAT GTCTCGCAAC GTGCGTTGGA AGCGAATACC CACGCCAAGA 
TATCGAACGG AAATGGCGAG TTCAACCGTA GCGAACCAGA CAACCAGCAA GCTGAAGCAT 
TCCATGACTG TGATCAAACG ACGGAGCTCC TTGCACACTT GACTGACCGT GTGAGTCACA 
TGGGAGACGG CGATATCCGA AAAGTCCTTG CTACATCCCG CCGTACACCA ATCAATTGTA 
CCCAGTCATC GGACAATCGA CAACAGTCTG TTCAACTCAA CGTTCTGGAA TATCAAGTCT 
CTCGTCATTC CGTTGAGAAC AAAACTGCTG CTCTAGTCGA TCGAGGTGCC AACGGTGGAC 
TTGCTGGCTG TGATGTCAAA GTTGTGAACA AGACAGGACG GTCTGCTAGT ATAACGGGTA 
TCAACGAGCA TACCCTGTCA GATTTGGATA TTGTCACTGC CGCTGGGTTT GTTGAGTCTC 
ACAAAGGCCC TATCATTGTG ATTATGCACC AATACGCCTA TCTTGGCAAG GGAAAGACCA 
TCCACTCCAG TGCCCAACTT GAGCATTACC GAAACACAGT CGAAGACCGG TCTCGCAATG 
TTGGAGGACA ACAGCGGATT GTTACCTTGG ATGATTATAT CATTCCTCTT CATGTTCGAC 
AAGGCCTCCC GTATATGGAT ATGCGACAGC CTACCGATAG CGAGTTCGAA TCTCTTCCGC 
ATGTTGTGTT GACTTCCGAT ATTGACTGGG ACCCTTCTAT TCTAGACAAT GAAGTTGACA 
TGGTGAACAA CTGGTACAAT GCAATGCAAG ATCTTCCGGG CAATGCCTAT GTTGAACCAC 
GATTTGACAA CACAGGCCAA TACCTCCACC GCCATATAGC GTACTACAAT CTCGATCGCG 
AGGACGCTAT TGATTGCATT ATCCAGTGTC GTAAGCACAA TGTCAAACGC AATGAACGGG 
ATTATGAAGC ATTACGTCCC TGCTTGGGAT GGGTATCCGG TGACACTGTC CGAAAAACCA 
TCATGGCTAC GACACAGTAC GCTCGCGAAG TCTACAATGC ACCGCTACGA AAGCACTTCA 
AATCGCGATT CCCGGCTCTA AATGTGCATC GGCGCAACGA GGCTGTTGCA ACGGATACTA 
TCTGGTCAGA CACACCTGCT GTTGACAACG GAGCCAAGTT TGCACAACTG TTTGTGGGGA 
GACGTTCCTT AGTCACCGAT ATTTATCCCA TGAAAACAGA CAAGGAGTTC GTCAATGCCC 
TTGAAGACAA TATTCGCCAT CGTGGAGCTA TGGATAAACT TCTGAGTGAT CGAGCCCAAG 
TTGAAATCAG TAAGAAGGTT GCTGATATTA CACGAGCCTA CAACATTGAC CAATGGCAAA 
GTGAACCTCA TCATCAACAT CAAAATTTTG CCGAACGCCG TATTGCTACT ATTGAAGCTA 
ATACCAATAA TGTTCTTAAC AAAACCGGTG CTCCTGATTC AACTTGGCTC TTGTGCATTG 
CCTACATCTG CTATGTCTTC AACCATTTGT CCCATGAATC TTTGCACGAT CGTACACCAC 
TCGAAATTCT TCTTGGTAGC ACCCCTGATA TCAGCGTACT TCTCCAGTTT CATTTTTGGG 
AACCGGTGTA CTACCGTCTC GAAGATCCAT CTTTCCCTTC CGATGGTACC GAAAAGAGCG 
GTCGCTTTGT TGGCATTGCT GAATCTGTTG GGGATGCTCT CACTTACAAA ATCCTCACGG 
ACGACACCAA CAAGATCTTA TACCGCTCCA GTGTGCGTTC CGCATTGAAA TCCGGAGAAA 
TCAACCTACG CCTTACGCCA CAGGAAGGGG AGAGTAATTC TAAGCCTATC AACTTTGTCA 
AGTCGCGTAG AACTGAAAAC AAAAATTCCT ATGCCTTAAA GGATCTACCC GGTTTCACCC 
CTGAGGACCT TATTGGACGC ACGTTCCCAA CCGATACTCA GGATGATGGG GAGCGTTTTC 
GTGCACGTAT CACAAGGAAA ATCTTAGATC CCGACAAGCC CTCTGA 

 

Protein sequence

MVPATRQMTS GAAYSHFLDN VFSLPQGHPI RLSFEQQGYN SVDDLLSIFE NELDALGYVP 
PASPDTHEDP QWTPLLMAHR QILRHFLRWQ ASLERQKGSP LENSELVALT SGDFILYRRS 
ALGQVSNVPA TISPSLNNQL STSTKARSAV DEFKRGVKRD KTHYPILKDD RYWDNFYRSF 
VVTAVSHNVE KVLDPSYAPT DPSEKSLFEE QKKFVYSALE HTLQTDMGKN LVREHSFDFN 
AQEVFRKVVK HYTESASAKI GNGGEGFILH WKNHLRIYND MVPMAEQLPK QLCLSLLENA 
VHDIPELRQV KITATLDLAK GGTPLNYEGY LSLLLASASL YDKGNNLSNS RSVKSKRSAF 
LTDLSYDQPD FTEDNGIDYD IDLSPAVIYE ANAHNRKVSP SGHRNRDPAT NRERPYIPRE 
MWNQLSDDAK AILQGLSAPD KGPTRSGDVS QRALEANTHA KISNGNGEFN RSEPDNQQAE 
AFHDCDQTTE LLAHLTDRVS HMGDGDIRKV LATSRRTPIN CTQSSDNRQQ SVQLNVLEYQ 
VSRHSVENKT AALVDRGANG GLAGCDVKVV NKTGRSASIT GINEHTLSDL DIVTAAGFVE 
SHKGPIIVIM HQYAYLGKGK TIHSSAQLEH YRNTVEDRSR NVGGQQRIVT LDDYIIPLHV 
RQGLPYMDMR QPTDSEFESL PHVVLTSDID WDPSILDNEV DMVNNWYNAM QDLPGNAYVE 
PRFDNTGQYL HRHIAYYNLD REDAIDCIIQ CRKHNVKRNE RDYEALRPCL GWVSGDTVRK 
TIMATTQYAR EVYNAPLRKH FKSRFPALNV HRRNEAVATD TIWSDTPAVD NGAKFAQLFV 
GRRSLVTDIY PMKTDKEFVN ALEDNIRHRG AMDKLLSDRA QVEISKKVAD ITRAYNIDQW 
QSEPHHQHQN FAERRIATIE ANTNNVLNKT GAPDSTWLLC IAYICYVFNH LSHESLHDRT 
PLEILLGSTP DISVLLQFHF WEPVYYRLED PSFPSDGTEK SGRFVGIAES VGDALTYKIL 
TDDTNKILYR SSVRSALKSG EINLRLTPQE GESNSKPINF VKSRRTENKN SYALKDLPGF 
TPEDLIGRTS RQAL