Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34920 |
Symbol | |
ID | 7200132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 662435 |
End bp | 663262 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179483 |
Protein GI | 219117377 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.1184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACAC CTGGCCAGAA TGAGAAAACG AAGGAGACAG AAGTCTCCCG AGATGAATCG TGTATGCAAC TTAGTGGCGA GCAGCTCTTT GCCACGTGTC CACATCAGCC ATCGAAACAA AAGATCGTCG AGACAAGCGA GAGCTTAATT GAAGGAACTT CGCAATTGAA GACTGAGAGG GCACGTCAGG ATGTGAGTGG ACCGAAGGTC CAACATGATA GCGCTACCAA GAATCGGCAG AAAAATGACA ATCAATCTGC AAGAAACAAG CGCGACGGTC GATCCTTCGC CAAGGTCCTA ACAGCTCCAA CCCAAGGAAA TACAAATGTA CCTCTGGCCA AGAATAGTGG AGTATTCATG CTTCTCCTTG TTGGCCTCCC GGGATCTGGA AAAACGACGC TGGCGTGCAG ACTTTTGGAG GAGTGGCCAG ATAAATTTGT CCGCATCAAT CAGGACGAGC TCGGAACGCG GCGAGAATGC GAGCGTTTGA CGCGTGACGC TTTGAGCGCC GGTAAATGCC CTGTCATTGA TCGGTGCAAC TTCGACAAGT CACAACGTCA AAAATTTGTT TCGATTGCGA AAGAATTCAG CGCCGACACT CTTGTTTACT GTATTGTTTT GGATGTCGAC CGCAAAGAAT GCATTGATCG CTGTCGACGC CGCACCGGTC ATCCGACCAT CAAGCCGGCG GAGGCGACAA AAATTATTTC AATGGTAGCG TCGCAGTACA AGCCTCCGAA GAAAGCAGGC GTCGAAGGCC TTAACCGGGT GTACAAAACG AATAGCACTG ATTCCGCAAT TGAACACATT CATGCTATGA TTGGGTGA
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Protein sequence | MTTPGQNEKT KETEVSRDES CMQLSGEQLF ATCPHQPSKQ KIVETSESLI EGTSQLKTER ARQDVSGPKV QHDSATKNRQ KNDNQSARNK RDGRSFAKVL TAPTQGNTNV PLAKNSGVFM LLLVGLPGSG KTTLACRLLE EWPDKFVRIN QDELGTRREC ERLTRDALSA GKCPVIDRCN FDKSQRQKFV SIAKEFSADT LVYCIVLDVD RKECIDRCRR RTGHPTIKPA EATKIISMVA SQYKPPKKAG VEGLNRVYKT NSTDSAIEHI HAMIG
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