Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34896 |
Symbol | |
ID | 7200122 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 614660 |
End bp | 615450 |
Gene Length | 791 bp |
Protein Length | 226 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179469 |
Protein GI | 219117349 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCCC AAGCCTTTTG GGATGTGGCG GCTCCGTTGA TTGCCGTCAC GGAAAAGCAT CCGTTTCTCG TTGCCATGGT CGACGGCAGT CTCGACATGG ACAGCTTTCA ATACTACGTT GTACAGGATG CCCTCTACTT GCACGACTTT GCCTACGCAC TGCGGCGTCT CGGCGACAAT GATGGTATTT CCCGACAAGA CTCCGAGCGA CTGCACGCTT TTGCCAAGGG TGCGGAAGAA GCCGAACTTA GTCTACACAA TTCATTTTTC AAGGAATGGA ACATTTCTGA CGATGGCGTA GAGCAAATGC CCCATTCCTT GCTCTACACT TCCTACATGA AACAAGTGGT TGCCACACGA CCTCACGCCG AAGGCCTGGC AGTTCTGTTG CCTTGCTTTT GGGTCTATAT GCACGTTGGA CAGTGCATGC TCAAGCTGCG CCAAGAGCTC GGTGACAGGT ACGTGATTGG AGTTGTATTG ACGACAAGTA CGAGCAAATT GTGCCGTATC TGGTTTTGTC TGACTGCATC GAATCATTCA CTGACTTTCC CTTTTTCCCG GCGTATAGCG TCCAAAGACC TCCGCAATTC GATGCCTGGA TCGACATGTA CGGTGGGGAG GATTTTGAAC ACGAGGTGAA AGATTACATT GCCATGAATA ACAAGGCCTG CCAAAGTGCC GACGCCGAAA CGTTGAAGAA TATGGAGAAG CATTTTCTTA CTTGCTGCAA ACTAGAGCAC ATGTTTTGGG ATCAAGCACA AGAACAAATG CAATGGCCGG TGATTGCCTA G
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Protein sequence | MSAQAFWDVA APLIAVTEKH PFLVAMVDGS LDMDSFQYYV VQDALYLHDF AYALRRLGDN DGISRQDSER LHAFAKGAEE AELSLHNSFF KEWNISDDGV EQMPHSLLYT SYMKQVVATR PHAEGLAVLL PCFWVYMHVG QCMLKLRQEL GDSVQRPPQF DAWIDMYGGE DFEHEVKDYI AMNNKACQSA DAETLKNMEK HFLTCCKLEH MFWDQAQEQM QWPVIA
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