Gene PHATRDRAFT_34884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34884 
Symbol 
ID7200114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp587823 
End bp589028 
Gene Length1206 bp 
Protein Length401 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179464 
Protein GI219117339 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.435198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTTGT TGATAAAAGG TGGAAGCAGT TTGACGGTAG TTTCTCTTGT TGTGTCAAAG 
CGTACGCCCG TAGCAAGGAT TTGCAAGCCG TCCATTTGGG ATTCTAGAGT TGGTTTCTGT
AGAAGGACCA ACAAAAATCG TCTCTACACA ACCTCGAATA TCGCCTCCCA GGAAGCGACA
CCCTCCAGCA CAAGTGTCTC TGACAGGAAA CTTTTGCCGT TCGAAACCAC GCCGCTGGGT
CGAAACGGAG CAGCACAAAT GGACGGTTTA GATCTTTACC AAGTCCCTGC CGACGATGAT
CACCCCCTTT CCGTGTACGG AATCCAAAGT ACCACGCCTG TCATGTTTGA CAAGGGATCA
TCGCTCCGCC CTGTATTGCT ACTGCACGGT CGTACCTGGT CCGCCGTTCC CGTTTACCAC
TTGTTGGGAG GCACGCAATA CGAGAAAAAC GGACAGCAGT CGCGATCGCT CATGGAAGCC
CTGCTGGCGA AAGGACTGCA ACCATACACA ATGGACTTTC GCGGCTTCGG TGGAACGCAT
GCGGATGAAA CAGGCTATGT CGAGCCTTCT AGATGCGTAC AAGATACCGA AGTCGTGTTG
GAATGGATTG CTCGTCGCCA TGGTATGGTA GGGAAAGAGT TTCCAGCGTT GTTCGGCTGG
AGCCAAGGCG CTTTAGTGGC TCAGTTGGTC GCCCAGAAAA CTCGTCCCCT CATGTCTAAA
TTGATTCTGT ACGGATCGAT ATACGACCCA ATGGTTCGCT ATCCCCGGGA ACCGTTGTAT
TCTACGAGTA AGCCCAATCG TACGGTGATC GAAAACACAT TTGACAACGC CATTGAAGAC
TTTACCATTG AAGGCTCGAT TGCCCCAGAA CCGGCACGTT TGTTTGCTGA AGCCGCCCTA
CAAAGTGACC CCGTGAAAGC CGTTTGGAGA CATCTCTATC AATTCAACAA TTGCGATCCT
GGGCGAGTTC ACGTTCCTAC CTTGGTGGTA GCGGGAGACC AGGATCCGTA CGCTCCTTTG
CATGTGCAGC AAGAACTTTT TTGTAACCTA GGCCGAGCAT CCGATCGTAC CTGGAGTATC
CTGGCCGATA GCGATCATGC TGTACATCTT CTGGAAGGCC GGGAACGTTT CATTTCCACC
GTGGTTAGCT TTGTGAAGAA TGGCAAACGT TCGGAAAACG ACGGTGGGCA AGATTACACA
TTTTGA
 
Protein sequence
MSLLIKGGSS LTVVSLVVSK RTPVARICKP SIWDSRVGFC RRTNKNRLYT TSNIASQEAT 
PSSTSVSDRK LLPFETTPLG RNGAAQMDGL DLYQVPADDD HPLSVYGIQS TTPVMFDKGS
SLRPVLLLHG RTWSAVPVYH LLGGTQYEKN GQQSRSLMEA LLAKGLQPYT MDFRGFGGTH
ADETGYVEPS RCVQDTEVVL EWIARRHGMV GKEFPALFGW SQGALVAQLV AQKTRPLMSK
LILYGSIYDP MVRYPREPLY STSKPNRTVI ENTFDNAIED FTIEGSIAPE PARLFAEAAL
QSDPVKAVWR HLYQFNNCDP GRVHVPTLVV AGDQDPYAPL HVQQELFCNL GRASDRTWSI
LADSDHAVHL LEGRERFIST VVSFVKNGKR SENDGGQDYT F