Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34884 |
Symbol | |
ID | 7200114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | - |
Start bp | 587823 |
End bp | 589028 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179464 |
Protein GI | 219117339 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.435198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTGT TGATAAAAGG TGGAAGCAGT TTGACGGTAG TTTCTCTTGT TGTGTCAAAG CGTACGCCCG TAGCAAGGAT TTGCAAGCCG TCCATTTGGG ATTCTAGAGT TGGTTTCTGT AGAAGGACCA ACAAAAATCG TCTCTACACA ACCTCGAATA TCGCCTCCCA GGAAGCGACA CCCTCCAGCA CAAGTGTCTC TGACAGGAAA CTTTTGCCGT TCGAAACCAC GCCGCTGGGT CGAAACGGAG CAGCACAAAT GGACGGTTTA GATCTTTACC AAGTCCCTGC CGACGATGAT CACCCCCTTT CCGTGTACGG AATCCAAAGT ACCACGCCTG TCATGTTTGA CAAGGGATCA TCGCTCCGCC CTGTATTGCT ACTGCACGGT CGTACCTGGT CCGCCGTTCC CGTTTACCAC TTGTTGGGAG GCACGCAATA CGAGAAAAAC GGACAGCAGT CGCGATCGCT CATGGAAGCC CTGCTGGCGA AAGGACTGCA ACCATACACA ATGGACTTTC GCGGCTTCGG TGGAACGCAT GCGGATGAAA CAGGCTATGT CGAGCCTTCT AGATGCGTAC AAGATACCGA AGTCGTGTTG GAATGGATTG CTCGTCGCCA TGGTATGGTA GGGAAAGAGT TTCCAGCGTT GTTCGGCTGG AGCCAAGGCG CTTTAGTGGC TCAGTTGGTC GCCCAGAAAA CTCGTCCCCT CATGTCTAAA TTGATTCTGT ACGGATCGAT ATACGACCCA ATGGTTCGCT ATCCCCGGGA ACCGTTGTAT TCTACGAGTA AGCCCAATCG TACGGTGATC GAAAACACAT TTGACAACGC CATTGAAGAC TTTACCATTG AAGGCTCGAT TGCCCCAGAA CCGGCACGTT TGTTTGCTGA AGCCGCCCTA CAAAGTGACC CCGTGAAAGC CGTTTGGAGA CATCTCTATC AATTCAACAA TTGCGATCCT GGGCGAGTTC ACGTTCCTAC CTTGGTGGTA GCGGGAGACC AGGATCCGTA CGCTCCTTTG CATGTGCAGC AAGAACTTTT TTGTAACCTA GGCCGAGCAT CCGATCGTAC CTGGAGTATC CTGGCCGATA GCGATCATGC TGTACATCTT CTGGAAGGCC GGGAACGTTT CATTTCCACC GTGGTTAGCT TTGTGAAGAA TGGCAAACGT TCGGAAAACG ACGGTGGGCA AGATTACACA TTTTGA
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Protein sequence | MSLLIKGGSS LTVVSLVVSK RTPVARICKP SIWDSRVGFC RRTNKNRLYT TSNIASQEAT PSSTSVSDRK LLPFETTPLG RNGAAQMDGL DLYQVPADDD HPLSVYGIQS TTPVMFDKGS SLRPVLLLHG RTWSAVPVYH LLGGTQYEKN GQQSRSLMEA LLAKGLQPYT MDFRGFGGTH ADETGYVEPS RCVQDTEVVL EWIARRHGMV GKEFPALFGW SQGALVAQLV AQKTRPLMSK LILYGSIYDP MVRYPREPLY STSKPNRTVI ENTFDNAIED FTIEGSIAPE PARLFAEAAL QSDPVKAVWR HLYQFNNCDP GRVHVPTLVV AGDQDPYAPL HVQQELFCNL GRASDRTWSI LADSDHAVHL LEGRERFIST VVSFVKNGKR SENDGGQDYT F
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