| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_34728 |
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| Symbol | |
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| ID | 7200186 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011674 |
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| Strand | + |
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| Start bp | 247328 |
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| End bp | 250409 |
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| Gene Length | 3082 bp |
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| Protein Length | 951 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002179164 |
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| Protein GI | 219116739 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.148187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACCT CCGCTCATTT CAAACTGAGC GACTTTCCTC ACAAAGTCCT CGATCCGATT
GCCACTCTCA CCGTTCCCCC GACCTACGCG ACCATCAAGC ATGCTCAACG CCAGCTCATG
ACCAACGCCG CCGCCATTCC CACGCTCAAT GGTGGTGGCG CCCATGGCCA TATGGCCTTG
ACCCTCACCC CCCTTGCCTA CGCCGACATC AGCAACGTCC CGTTCGTCAT TCCCGTCGCC
CCTCCGGCCA ATCCGCCCCC CGGTGCCACG CAACCGCAAA TCACCGAAAA CAACCGTGTC
CATCAACGCG ACGCTGACAT CTATAACTTG TATGTTGCCG TCAACAATGC CCTCCGCCAG
CAGCTTCTCG ATGCGATTCC TCGCATCTAT GTGCGCGCCC TTGCGCACCC GATGTTCGAG
TTCAGCAATG TTACCTGCCT TGATTTACTC TCGCATCTCT GGACAAAGTA CGGCACCATC
AAGCCCGCCG AACTTCAGAA AAATTTCCAG TCCATGTACA CCCCCTGGAA CACCACTGAA
CCGATCGAGT CCGTGTTTCT CCAGCTGGAC GAGGCCATTG CGTTCTCCAC CGATGGCAAT
GACCCCATCT CGGAGGCTGC TGCAGTTCGA GCCGGCTACG AAGTCATTGC GCACTCTGGC
CTGCTCCCTC TTGACTGCAA AGAATGGCGC AAACTGCCTC TTGCTTCTCA CACCCTTGCA
AATTTTCAGC AGCACTTCTC CCTTGCCGAC GACGACCGGC GCCTTACGGC CACTACCGGT
TCACTTGGCT ATGCCAACGT TCTCGCTGCT ACTCCCTCTC TGGCTCCAGC CACGGTTTCC
GACACCCTCA GCCTGCCTTT CTCCGCGCTC TCTGTGTCCC AGCCTTCTGT CTCCTCCCCG
GACATGACCT ATTGCTGGCC CCATGGGACC AGCAAGAACA GGCGCCACAC CAGTGCCACT
TGCAAGAACA AGGCCCCTGG TCATCGCGAC GACGCGACGG CCACCAACAC CCTTGGCGGC
TCCACCAAGG TTTGGACTGC CCCCAAACCT CCCGAATAGG AAAGAGGGAC GGCTACGCCG
ACGATTAAAA CTAGTAATAC CGATTATTTA AATCATATTA CTAGTCTTAA CTCGTCTGTA
GCCCCCTCCC CGCCTAGTCC ACACACCTCA GCCATTGCCG ACACTGGCTG CACTGGCCAC
TACATCACGG TCAACTGCCC TCATACCCAC AGGCACCCAG CCAACCCCAG CCTAGCAGTC
CGTGTCCCGA ACGGCGCAGT CCTCCGATCG AGTCATGTTG CCACCCTGGC CCTTCCTGGT
TTCTCCCCTG CCGCCTGCCA AGCACATATT TTTCCTGGGC TTGCCTCCCA TCCGCTCCTC
TCTATTGGAC AACTGTGCGA CGACGGTTGC ACGGCAACCT TCTCGGCCAC TCGGCTCGAC
ATTCATCGTG ACGCTACACT GCTGCTCTCT GGTGCCCGCT CCCCCCACAC TGGTCTCTGG
CACCTCGATC TTGCCCCCGC TCCCTCTCCT GCGACGGCCC ACGCCCTTGT TCCCCACACA
CCCCTTGCCG ACCGCATTGC TTTTGTCCAT GCCTCGCTCT TCTCCCCGGC ACTTTCAACG
TGGTGTCAGG CACTCGATTC CGGCCATCTT ACCACTTTTC CCGACATTTC CTCCCGACAA
GTCCGCAAAT ATCCACCCAG CTCCTCCGCC ATGGTCAAGG GTCACCTCGA CCAACAACGC
GCAAACCTTC GCTCCACCAA GCTTCCCCCT GTTGGTTCCC CCACCACGAC TGCACCCCCT
GCCCGCTCTG TACCCGACCT TGATCCTCCC AATGCCCCAC CAGTCGCACG TACGCACCAC
GTCTTTGCTG CTCATCAGCG CGTCACCGGA CAAATCTACA CCGACCAACC AGGCCGTTTC
CTTACTCCTT CAAGTGCCGG CCATAACGAC ATGCTCGTAC TGTATGATTA CGACAGCAAC
GCCATCCACG TTGAACTCAT GAAGAACAAG TCTGGCCCCG AAATTCTCGC CGCCTATAAA
CGCGCTCATG CTCTTTTCAC CCAGCGAGGC CTCCGTCCAC AACTCCAGCG CCTCGACAAC
GAAGCCTCTG CAGCCCTCCA GTCCTTCATG ACCTCAGAGC ACGTCGACTT TCAGCTGGCA
CCCCCCCATC TACACCGTCG TAATGCCGCC GAACGGGCCA TCCGCACCTT CAAGAACCAT
TTCATTGCTG GCCTCTGCAC CACGAACCCG GATTTTCCCC TGCATCTTTG GGACCGCCTC
CTCCCCCAGG CCCTCATCAC CCTAAATCTT CTTCGTCGCT CCCGCATCAA CCCCAAGTTG
TCCGCCCACG CACAGCTTCA CGGTGCCTTT GACTACAACC GAACCCCGCT TGCTCCTCCC
GGCACTCGCG TCTTGGTCCA TGTCAAGCCG TCCGCTCGCG AAACATGGGC CCCCCATGCT
GTTGAAGGTT GGTATCTCGG CCCCGCTTTG AACCATTATC GCTGCCATCG CGTATGGATC
ACAGAAACAC GAGCCGAACG TGTTGCTGAC ACCCTTTCTT GGTTCCCGAC CCGCCTCTCC
ATGCCTTCCG CCTCCTCCAC CGACCGAGCC CTGGCCGCCG CCCGTGATCT TGTCCATGCG
CTCCAAAATC CCTCCCCCGC CTCCCCGTTT GCGCCCCTCA ACGCCCACCA GCACCAGGCC
CTCACACACC TTGCCGATCT CTTTGCCACG GTGGCCGCCC CGGCCGACGA CGCCCCCGCA
CCTGCTCCCG TGCCTCCGGT CCGTCCTCCT ACCCCAGCAC TTCCCCCAGC TCAGGTCCGT
TTTGCCGTCC CTCTCGTCAC GGCCGAACAT GCCCCAGCAC TTCCGAGGGT GCCCGTTCCT
ACCGCCGCAC TTCCGAGGGT GCCCCCCATG GCTACCTATC ACTCGCGCAC CGGTAACCCC
GGCCGTCGCC GCCGCAAAGC ACGCAAACAA CCGGCAACCC CAACCCTAGT TCCGGCGCAT
CCACACAACA CCCGCACCCG ACCCTTTCTT GTCCCGGCCT CCGCCAACGC AGTTGTCGAC
CCCGCAACCG GCGCCTCCTT AG
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| Protein sequence | MSTSAHFKLS DFPHKVLDPI ATLTVPPTYA TIKHAQRQLM TNAAAIPTLN GGGAHGHMAL
TLTPLAYADI SNVPFVIPVA PPANPPPGAT QPQITENNRV HQRDADIYNL YVAVNNALRQ
QLLDAIPRIY VRALAHPMFE FSNVTCLDLL SHLWTKYGTI KPAELQKNFQ SMYTPWNTTE
PIESVFLQLD EAIAFSTDGN DPISEAAAVR AGYEVIAHSG LLPLDCKEWR KLPLASHTLA
NFQQHFSLAD DDRRLTATTG SLGYANVLAA TPSLAPATVS DTLSLPFSAL SVSQPSVSSP
DMTYCWPHGT SKNRRHTSAT CKNKAPGHRD DATATNTLGG STKPPPRLVH TPQPLPTLAA
LATTSRHPAN PSLAVRVPNG AVLRSSHVAT LALPGFSPAA CQAHIFPGLA SHPLLSIGQL
CDDGCTATFS ATRLDIHRDA TLLLSGARSP HTGLWHLDLA PAPSPATAHA LVPHTPLADR
IAFVHASLFS PALSTWCQAL DSGHLTTFPD ISSRQVRKYP PSSSAMVKGH LDQQRANLRS
TKLPPVGSPT TTAPPARSVP DLDPPNAPPV ARTHHVFAAH QRVTGQIYTD QPGRFLTPSS
AGHNDMLVLY DYDSNAIHVE LMKNKSGPEI LAAYKRAHAL FTQRGLRPQL QRLDNEASAA
LQSFMTSEHV DFQLAPPHLH RRNAAERAIR TFKNHFIAGL CTTNPDFPLH LWDRLLPQAL
ITLNLLRRSR INPKLSAHAQ LHGAFDYNRT PLAPPGTRVL VHVKPSARET WAPHAVEGWY
LGPALNHYRC HRVWITETRA ERVADTLSWF PTRLSMPSAS STDRALAAAR DLVHALQNPS
PASPFAPLNA HQHQALTHLA DLFATVAAPA DDAPAPAPVP PVRPPTPALP PAQVRFAVPL
VTAEHAPALP RVPVPTAALP RFRRIHTTPA PDPFLSRPPP TQLSTPQPAP P
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