Gene PHATRDRAFT_34712 details

Gene Information

• Locus tag: PHATRDRAFT_34712
• ID: 7200179
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 201683
• End bp: 203671
• Gene Length: 1989 bp
• Protein Length: 662 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002179155
• Protein GI: 219116721

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.183935
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACTCG ATTCGATAAA CGAGAGCGGT AGCAGTAACA ACACAACCAA CAAAAACAAT 
CATACGAATA CAAACGATGG TCCCGCGGAA AGTGGCCAGA ACCGGCGACG GAGACGTCGC 
TGGGGGGAAG TTCCGCCGGT TCCCGCCACC TCCCTTACAA CAACAACAAC AACAACAACG 
AACGCTCCGT CCCCACCGGA ACTGGATCCC AAAGCCAAAG TGCTGGCAAT GCAAGAAAGT 
ATTCGGGCCC GGTTAGCGGC TGCCAAAGCC AAACAAGAGT TACAAAAAAC CATTGCGGCA 
ACACCCATTG CGACGAATGA AGCAGCATCG GGTGCGAGCA AACGGCCTCT GGCGTACGAA 
CCCCCAAACG GTCTGCCGAA AGCAACCAAA CGTGCCAAGA CGTACAATAT TGACTTGTCG 
GTGACGGCAC CCACTTTCCA AAAAGGTACA AAAGCAGTCG GCGACGCGAC GACTACCGGT 
ACCAGTCCCG CACCCGCGGT GCCGCTCCAA AAGGTGAACA ACCCGTACTT GGCTCATTTG 
GAAGAGCACG ACACCGAAGC CGTCGTGGAC GATCGCTTGG ATCGAGCCTC AAAACCGCGG 
CGGCCGCACA AACCCTTGCA TTTTATCGAA CCGGGCACCT TTGCCGCGCT GGCCGAGCGC 
AAACGCGAAA AAGCCGCACT CGCGCAGGCG AGTGGGTACG TGTCGGGGCG CAAGACGGGG 
CACACGATTG TTTCCGCCAA CCTGGCGTCC GTGTACGGTC CGCAACACGG GAGAGATGAA 
GAGGAAGACG AGACACTCAA ACCGCGGTGG GACGCACATC CGGATACCAA AATGCCTTTG 
ACGATGGAAT GGTGGGATAC GGAATTGTTG CCCCAGAAAT TGAAAAAGCA AGTGGCGGCC 
GCGGAAGCAA AAGAACTCAA TAGTCAAGCT CAAGCGCAGT TGGTGAATCT AGACGACACG 
GACACTGGTA CCAAGGCAGT GACCAGTGTT GCTGCAGACG GAAATTTCGA GGCCTTGCAA 
AAAGCGTGCT TTGATCAAGC CGCGCTATCC TACAGCAAAA CTGCAGCCTT GGTTCAACAC 
ATCGTGCCAA TCAAACCACC GAACGCACCG TCCGGTCCGG CGAAACAGGC GGTCTTGCAT 
TTGACACGAA AGGAACTCAA ACGTCAACGA AAGCTGCGCC GGCAAGAGAA GCAACGTGAG 
ATGCAAGATT TGCAAGCTGC TGGTCTAGTA CCCGCACCCG AGCCTCGCTT GACCTTGTCC 
AATTTTATTC GTGTGCTGGG TGATCAAGCA TTTTTGGATC CATCGCATAT GGAACAAAAG 
GTTGCTCAGC AAATGCAGGC TCGGCAACAA GCCCATTTAA AACGGAATGA AACCAACAAA 
TTGACGAAAG AACAGCGGGC CGCCAAGCGC ACCAAAAAAC TACAGGAAGA CACTTCGCAA 
GGGGTCACTG TCGCGCTGTT TCTAGTGCAG GACTTGTCCC ATCCCTTGTT GCGCGCGAAC 
CTGGATTTGA ACGCCCAGCA AAACAACATT TCTGGAGCAG TAATCGAATG CCAAGATCCT 
TCACTAGGCT GTGTGATTTG CGAAGGCGGT CCCAAAGCAA TCAAACGCAT GACGCGACTC 
ATGTTGGTAC GGATGAAATG GCGGGGCCCT GATGACGGAG AAGAATTGGA GTACGAAAGC 
GATGAAGAGG ATGAAGCTGG TGAGTATTCT ACACACAAAT ACAATCCTGA TAACAAGTGC 
GAATTGGTCT GGCAAGGAAT GGCGGTCAAG CGAGTCTTTA ATGGCTTTCT CTTTCAGTCG 
GTCGAAACTT CCAATCAAGC GCGCAAAATT CTCAAAGCCA AAGGGGTATC TCACTATTGG 
GATCAACTTT TGATATGCAA AAGTGGTCGC GGCGAAGTCT TTCGCTTGAA GCTAGGCGAT 
GACAGTGAAG ACGAAGAAGG CAACCCGTTT GAGAAGCTGG ACGAAGACAT TGTCATGGCT 
GACGAGTAG 

 

Protein sequence

MTLDSINESG SSNNTTNKNN HTNTNDGPAE SGQNRRRRRR WGEVPPVPAT SLTTTTTTTT 
NAPSPPELDP KAKVLAMQES IRARLAAAKA KQELQKTIAA TPIATNEAAS GASKRPLAYE 
PPNGLPKATK RAKTYNIDLS VTAPTFQKGT KAVGDATTTG TSPAPAVPLQ KVNNPYLAHL 
EEHDTEAVVD DRLDRASKPR RPHKPLHFIE PGTFAALAER KREKAALAQA SGYVSGRKTG 
HTIVSANLAS VYGPQHGRDE EEDETLKPRW DAHPDTKMPL TMEWWDTELL PQKLKKQVAA 
AEAKELNSQA QAQLVNLDDT DTGTKAVTSV AADGNFEALQ KACFDQAALS YSKTAALVQH 
IVPIKPPNAP SGPAKQAVLH LTRKELKRQR KLRRQEKQRE MQDLQAAGLV PAPEPRLTLS 
NFIRVLGDQA FLDPSHMEQK VAQQMQARQQ AHLKRNETNK LTKEQRAAKR TKKLQEDTSQ 
GVTVALFLVQ DLSHPLLRAN LDLNAQQNNI SGAVIECQDP SLGCVICEGG PKAIKRMTRL 
MLVRMKWRGP DDGEELEYES DEEDEAGEYS THKYNPDNKC ELVWQGMAVK RVFNGFLFQS 
VETSNQARKI LKAKGVSHYW DQLLICKSGR GEVFRLKLGD DSEDEEGNPF EKLDEDIVMA 
DE