Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34672 |
Symbol | |
ID | 7200078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 102723 |
End bp | 103769 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | |
GC content | 58% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179138 |
Protein GI | 219116687 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTCCA CGACTACGAC CCCCCGCACG CTCCATCGCA AACCCAAGGT TGTCTTTCTG AACGCGGCTC GTCTCGACTA CGATCAGCAG CTCGACTGGT CGCGTTTGCG GAATCTTTGC GACGAACTGA CTCTCGGTGA CCGGGACACC GTCACGGACG AGGCCGAGCT GCTACGCATG GTCCAACAAC AGGATATCGT CGTCGCCAAG GAAATGCCCG TACCCGCCCA CATTCTGGCA CAATTCCCAA ACACGGTCCG ACTCATTTGT GAAGCCGGGA CGGGATACAA CAATTGGCCC GTCGCCTTGG CCCGCAAAAG CCGGGACCTG CCCGTATGCA ACCTTCCCAC CTACAGCACC GAAGCCGTCG CGCACATGGC CGTCACCTAC ATTATGAACT TTTCCGTCAG CATGTTCCGA CAACAAGAAA TGCTCCGACA AGGGGACCGC CGGAACTTTA CCGGACCCTT CACGCTACCG CTGCGGGAAC TCAACGGCAG TACGGTGGGC TTGGTTAGTG GAGCCGGACG TATCGGCACG CGAGTCGCCC ACGTCTGTCT CGCGCTCGGA ATGAAGGTTT ACGTTTCTAG TCGGGCAGGA CAGTTCGCTC CTGATCACAC TCTGTACGGA CACCCCGACG TCGTGTGTAC CAGCGACGTC GACGAGGTCT TGCGAGTGGC CGATTACGTT TCCATCCATA CTCCTTTAAA CGAACAAACG CGAGGCAGCT TTGGAAAGGC GCAGATTGAG CGAATGAAAC CCACCGCCTT TTTAATCAAC ACCGCACGGG GGGCCGTCTG TGCCGAAGAC GAACTCGTTG CGTGTTTGCG AGACAACGTC ATTGCCGGGG CCGGACTGGA CGTGACCGCG ACGGAACCGC CGGCCATGGA CAGTCCGTTG TGGGACTTGC CCAACTGCTG GCTCTCTCCG CATACCGGAT GGCGGCGACT GGAAACAAGA CAACGACTCG TGGATATGAC GGCCGACAAT ATTGAAGCCT TTGTCAATGC CAACAGTCCG AAAGATTACA TCAATGTGGT GAACTGA
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Protein sequence | MSSTTTTPRT LHRKPKVVFL NAARLDYDQQ LDWSRLRNLC DELTLGDRDT VTDEAELLRM VQQQDIVVAK EMPVPAHILA QFPNTVRLIC EAGTGYNNWP VALARKSRDL PVCNLPTYST EAVAHMAVTY IMNFSVSMFR QQEMLRQGDR RNFTGPFTLP LRELNGSTVG LVSGAGRIGT RVAHVCLALG MKVYVSSRAG QFAPDHTLYG HPDVVCTSDV DEVLRVADYV SIHTPLNEQT RGSFGKAQIE RMKPTAFLIN TARGAVCAED ELVACLRDNV IAGAGLDVTA TEPPAMDSPL WDLPNCWLSP HTGWRRLETR QRLVDMTADN IEAFVNANSP KDYINVVN
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