Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_34647 |
Symbol | |
ID | 7200065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011674 |
Strand | + |
Start bp | 44348 |
End bp | 45751 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002179126 |
Protein GI | 219116663 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.944358 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCACT TTTGCCGTAC CCCACCAAGC CACGTCGTCG GAACCTCGAT ACTTCTACGA CTACTCCTAC TCCTGGCGGC GTCGTTGTTC GCCACCTGCT CCTCCGCTAC CGAAACCGTG ACGGAAACCT CGCAGGCAAC GACTGTCGAG GACGGGACGA CGGGAATCCC CAAGCTCTCC ACCAATGATG CTACGACGAA AAAAGCCAAG AATCCGTTCA CCAATCGTAC TTGGATCGTA ACGGCGACGG CTCCCGTTCC GTCTCGACCC GTCAATCCGT TTGCCGCGGA TACGACGACC GAAGCTCCGT TGTCTCACTG GACGTGCTTT CGGACGGCGT CGTCACCACG CCAGCCTGTC ACCGCCGCCG ACAAGCTTGC CTGCTGTCAA CAAATCTACC GAGTTATGCA GAAAGAACCA ACCTTGTGTT GGAACGGTAA GAAGGGGTGT AACAGCAAAG ACCACCGGAG TGCCTTTTTT CCAGTCTGCC AAGAACTCAT TGCGGTGGTA CCGAATCTTT CCCCCCACAC ACCCGTATCT TATCGTCCAC ACTTTCAACC ACAATTCACC TTTGTCTGGA CGCGCTTTGT ATCGCCGCCA CCGAAATCCT GGCGACAATG TATGAGTTTC TCCAATACCA ATACGACGTC TACGCAATGG TTCTACACCG TCACGTCTCC ATACGAACTT GCCATGGATC CGTACCGGCT CTTCAACATT GTGGAACCGA CCAGAGGAAT ACCGTCAAAA GGCAGTAACA ACAAACGTGA AGTAGAGGTG GATGGACATT TTACGGCAAC TTTAATGACC GAGATCGCTC CTTCTCCCAA CGACGATCGC GAAAATGTAG AGCGAATTCT ATACCACCAA ATTCTTCCCA ATATAACCAA GCGTAATGCA AATGCCGGTC ACAATAATCA GTCTTTCCAG AGCTTTTCGC TATTTCTGCA GATCTTCTAC ACCCTTCCTC AAGGTATTCG GATACCCGCT CAGGAGCAAC TGAGATGTCG CACAACTTGC GGAGATTCCT GTACACTCGC TTGGTCCGAG TCAGCCCCAA CGATTGTTAA AAGCAACAAA AATCAACCCC AAGAGTGTCG TTCATTGGAC TTGGTCTTTG CGATCGATGA CGTCGCTCCA CATGACTGCA AAGTGGCCTG GAAAATTCCC ATCATGTTGG ACTTGGACGT GGTGGACGAG GAAGCCGCCT GGGTCCCGGC ACCCGTACTT GTCGCGGGCC AGGCGCAAGC TCTCACTACC AATGAGGAGA CAATGCCTAT AGAGCCAATA CAACTGTGGA AGAGTAGTGC AACCGCAGCT ACGGGTTCAT CGTATCACAA TCCTTTGCCG CTGGATTTAG ATCGGGTTCG AGACGAACTG GAACCTTGGA TGGAAGAACT ATAA
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Protein sequence | MDHFCRTPPS HVVGTSILLR LLLLLAASLF ATCSSATETV TETSQATTVE DGTTGIPKLS TNDATTKKAK NPFTNRTWIV TATAPVPSRP VNPFAADTTT EAPLSHWTCF RTASSPRQPV TAADKLACCQ QIYRVMQKEP TLCWNGKKGC NSKDHRSAFF PVCQELIAVV PNLSPHTPVS YRPHFQPQFT FVWTRFVSPP PKSWRQCMSF SNTNTTSTQW FYTVTSPYEL AMDPYRLFNI VEPTRGIPSK GSNNKREVEV DGHFTATLMT EIAPSPNDDR ENVERILYHQ ILPNITKRNA NAGHNNQSFQ SFSLFLQIFY TLPQGIRIPA QEQLRCRTTC GDSCTLAWSE SAPTIVKSNK NQPQECRSLD LVFAIDDVAP HDCKVAWKIP IMLDLDVVDE EAAWVPAPVL VAGQAQALTT NEETMPIEPI QLWKSSATAA TGSSYHNPLP LDLDRVRDEL EPWMEEL
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