Gene PHATRDRAFT_34638 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_34638 
Symbol 
ID7199918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp25780 
End bp26724 
Gene Length945 bp 
Protein Length314 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179121 
Protein GI219116653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTAA TATCTTCGTC ATATTGGATT GCCAATCTTT GGACTTCGCC GATAAAGGCG 
ACTCCTCCAC CGTCCTCTTT ACATACTCAA GGATTGACAG CTGCATGCAA CTGGCTTACA
GTTAGACCAT CGGCAGCGAG AAGACGGTGT GTACGAATAA GACATTTAGC GCACTTCCGA
GATCAAGCTG ATCACGATCT TGGATATTTA ACGCCGCTGA CAGCTACAAC TGCTCATCCG
AACCAAACGC TACCAGAATT CGATAATATT TTGGGCGAAG CCGATCTCAC GTCGGAACTA
TTCGCAGATT TGACAATCAA ATTTCAAATA AGGTCCGTCG AACACTGCAT TAGCCAGGAA
TCGGAAAGCC TAATGAGAAG GCTGTCGTAC GCTGCTCTTT TGCTTCTTGG AACAGTGGTA
GCAAGCAACC TACTAGGGGC CTTGCTGTAC AACTCGAACG CTGCGCAAGA ATGGCGCTAC
TGGTGGCCTC TCACAGGTGT TGTATACGTT GCGCAAGCCT ACCAGAACCT TTCGGAGAAG
GATTTTGGTG GGAAATCCGT TCCGCTACTA CCCTTCCCAA TAATTTCCGT GTGGGCTAAC
ATCCTTGCCG GACTCTGTGG TATTGGACTG GTTGTTGGTG GCGCCTACGA TGCCTTTATG
CCTGTATGGA TGATGGGACC GAATGTAGTG ACCGAAGCTG GTATTGGACA GGATAGTGCC
GTAGCTCTGA TGTTACTCAC TGCGTACTCC GTGTTGAATT GTACCACTTC GGCGAGGAGT
TTTAAAGACA CAGACTCGGG CATCCATAGC TGGTGCTCGC CCCACTTTCC GAATAGCGCG
CAACTACTGG CACAAATTGC ACTTTTGTCG CAATTGTACA TACTGGGAGA CGGCTCCATC
AATGCTATCC TTGCAGACGT ATTCTCAGCG TTGCCAGTTA ATTAA
 
Protein sequence
MRLISSSYWI ANLWTSPIKA TPPPSSLHTQ GLTAACNWLT VRPSAARRRC VRIRHLAHFR 
DQADHDLGYL TPLTATTAHP NQTLPEFDNI LGEADLTSEL FADLTIKFQI RSVEHCISQE
SESLMRRLSY AALLLLGTVV ASNLLGALLY NSNAAQEWRY WWPLTGVVYV AQAYQNLSEK
DFGGKSVPLL PFPIISVWAN ILAGLCGIGL VVGGAYDAFM PVWMMGPNVV TEAGIGQDSA
VALMLLTAYS VLNCTTSARS FKDTDSGIHS WCSPHFPNSA QLLAQIALLS QLYILGDGSI
NAILADVFSA LPVN