Gene PHATRDRAFT_26980 details

Gene Information

• Locus tag: PHATRDRAFT_26980
• ID: 7200054
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 1011821
• End bp: 1013918
• Gene Length: 2098 bp
• Protein Length: 551 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002179336
• Protein GI: 219117083

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.24942
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CTCGTCTTTG CTGTTAAGAC GCACCAAATC GTGTACGCTT GTTGTTCTCT GACTGATTGA 
AGTACAATGA ATAACGCAGC GGCCTCAGGA CTGGTACGTG TTCCGCAGGT TGTCGGCTAG 
TCGTGTAGGT CGCGAACGTT CCGTTTGGTG CGGGTTTATC CGTTTCGTCG TTGAGTGCGT 
TGTGGGTTTG CGCCTTGATT TGCCTGATGC AAGTATTCCA AAAATAGAAT CTTCCGTGTT 
GCTGGCACAT GTCATCAAGC CCTGGAAAAA AATTTAACTC CAAAAGTGTA CCTTTGCAAT 
AGATTTGCAC AAACGTTCGC ACACACCCTC ATTGTTGAGA TTTTCATTGT CTGCAGTTTC 
TCGGGGGTAC CCGCGAATCG GGCGAAGACG TCCGCGTTGG GAACGTGACA GCCGCAATTG 
CGGTTGCCAA CGTTGTAAAG TCGAGTTTGG GACCCGTCGG TTTAGATAAA ATGCTCGTGG 
ACGACATTGG GGATGTTACG ATTACCAACG ATGGTGCGAC TATTTTGGCT CAGCTCGAAG 
TCGAGCATCC CGCGGCGCGC CTTTTGGTGG ATCTGGCACA GCTCCAGGAT AAAGAGGTTG 
GTGACGGAAC GACGTCGGTT GTCATTATCG CCGCGGAGCT TTTGCGAAGA GGAAACGATC 
TCGTGAAAAA TGGAATTCAT CCCACTACCA TTCTCTCGGG TTATCGTTCT GCGTTAAAGG 
CCGCGGTGGC TTACATCAAA AGCACTATGG TGGTACCGGT ATCCAAGCTG TCGGACGAGC 
ACCTTTTGCA AGCTGCTCGC ACCTCCATGT CCAGCAAACT CATCGGCAAG GAAGGAGACT 
TTTTTGCACA GCTTGCTGTC GATGCCGTCA AGAGTGTAGC TACGATAAGT CCCTCCGACG 
GCAAGGCCAA GTACCCCCTG TCGGCTATCC ACATCCTCAA GGCACACGGC AAGTCAAGCT 
TGGATTCACA CCTTATGCAA GGTGGTTTTG CCCTCCTGGG CACTCGAGCT TCCCAAGGTA 
TGCCCTCGAC GATTGATCCT GCTGACGGTG AATCCGATGT CAAAATTGCC ATGTTGGACA 
TGAACTTGCA GCGTCACCGC ATGGCAATGG GCGTACAGAT CCAAATCACG GATCCCAAAG 
AAGTCGAAAA CATCAAGAAA CGGGAGCTCG ACATTACCAA GGAAAAAATT CAAAAAATTC 
TGCAAACGGG AGCCAAGGTC GTCCTCACCA CCAAGGGTAT CGACGACACG TGTATGAAAT 
ACTTTGTCGA AGCAGGTGCT CTGTGCGCAA GGCGGTGCAA CAAGGAGGAC TTGAAGCGCT 
TGGCCAAGGC AACCGGCGGT AAGCTAGTTG TCACCCTGGC CGACATGGAG GGTGAAGAGT 
CCTTTGATGT GGACTCGCTT GGTAAATGTA CGTCGGCTGC TGAAGTCCGT GTAGGCGACG 
GCGAGATGCT ACATTTTTAT GGTTGCAAAG GGGCCGGGGC ATCCACGATA GTACTGCGAG 
GAGCGAACGA ATACATGCTA GATGAAATGG ATCGGGCCTT GCACGATGCG CTTTGCGTCG 
TTAAAAGAAT GCTCGAGTCG TCTACCCTGG TTCCAGGTGG TGGAGCTGTG GAAGCGGCCC 
TATCCGTATA TTTGGAGCAA TTTGCGGAAA CACTGGAAAC ACGAGAGCAA TTGGCTATCC 
AAGAGTTTGC CGACGCATTG TTGGTGATTC CCAAAACTCT CGCTGTCAAT GCGGCGAAAG 
ACAGCTCCGA ACTTGTCGCC AAGCTTCGGG CGGTTCATGC CAAGCACCAG AAAGCTGAGA 
ACCCCACGGA TACCGATTAT CAAAATTTTG GACTGGATCT AATAAATGGT GAAATTCGCA 
ACAATCTTTT GGCCGGTGTT GTGGAGCCCG CGATGTCAAA GATCAAATCC TTACGCTTTG 
CCACCGAAGC TGCGATAACG ATTCTACGTA TTGACGACCG CATCACAGTG TCGGAACAAG 
GATAACCTAA TGGCTAAAAA AGATGAAGAG ATCCAGCAGC GTATACATTT CCACCATTTT 
GCTAAATGGT TGTCCATTTC GACGGCACGG TCATAAAGTA GCGCTCCATT GCATTTGT 

 

Protein sequence

MNNAAASGLF LGGTRESGED VRVGNVTAAI AVANVVKSSL GPVGLDKMLV DDIGDVTITN 
DGATILAQLE VEHPAARLLV DLAQLQDKEV GDGTTSVVII AAELLRRGND LVKNGIHPTT 
ILSGYRSALK AAVAYIKSTM VVPVSKLSDE HLLQAARTSM SSKLIGKEGD FFAQLAVDAV 
KSVATISPSD GKAKYPLSAI HILKAHGKSS LDSHLMQGGF ALLGTRASQG MPSTIDPADG 
ESDVKIAMLD MNLQRHRMAM GVQIQITDPK EVENIKKREL DITKEKIQKI LQTGAKVVLT 
TKGIDDTCMK YFVEAGALCA RRCNKEDLKR LAKATGGKLV VTLADMEGEE SFDVDSLGKC 
TSAAEVRVGD GEMLHFYGCK GAGASTIVLR GANEYMLDEM DRALHDALCV VKRMLESSTL 
VPGGGAVEAA LSVYLEQFAE TLETREQLAI QEFADALLVI PKTLAVNAAK DSSELVAKLR 
AVHAKHQKAE NPTDTDYQNF GLDLINGEIR NNLLAGVVEP AMSKIKSLRF ATEAAITILR 
IDDRITVSEQ G