| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_26948 |
|---|
| Symbol | |
|---|
| ID | 7199979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | + |
|---|
| Start bp | 905006 |
|---|
| End bp | 909365 |
|---|
| Gene Length | 4360 bp |
|---|
| Protein Length | 1276 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179315 |
|---|
| Protein GI | 219117041 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ACACAATCCA GCGACCACGG CAACTCACTC TGTCCGGACC TTGTTTACAG TTTCCCTCCC
CCTTTTTTCT TCTCCGCGAC AACGATCATG ACGGAAACGA ACGTACCCAC CATTCCGTTT
CCTCTCATTG ACTTGGTCCC GAAGAAAGAA ACCAACGTGC GGCGTTTTCT GGAAGCCTAT
CCGGAGTACG ATGGCCGGAA TGTGATTGTC GGCATTCTGG ACACGGGGGT GGATCCGGGT
GCGCACGGGC TCGGGACGTT GCCGGACGGC ACGACACCCA AGCTATTGAA CGTTGTGGAC
TGCACCGGAT CCGGAGACGT CGACGTGTCG ACGCAAGTCG AACTCCAACG GCATGTAAAT
GCCGACGCCG ACGACGGTAG CGACGGAAAC GTCCACGAGT ACTATCACGT GGAGGGGTTG
ACGGGTCGAC GACTCCGCTT ACCTACCAGT TGGAATTATC GCGACTTTCC CACACCGAAA
GACTCGAACA AAGACGAAGC GACGAGCGCC AACGGCAACG ACACCGCTGT CGACGATACA
CCCACGCCAC TCACCACACC GCTTCCCCAG GTGCGATTGG GGGTCAAGCG CGCGTACGAA
CTGTTTCCGG CCAAACTCCG GGAGCGTGTG CAAGAAACAC GCCGGCAGGC TTTTCAAGCC
CAACTCGATC GCTATGTAGT GGACGTCCGT CAACAGCTGG CCGCCTGGAA TGTCGCACAT
CCCAAACCAC CAACGTCTCC GGAAGAAGCC AAAGTACGTG ACGATTTGCA GGCTCGTTTG
GATGTTTTGT TGGACAGTGA GTGGAACGAC GACCCGGGCC CACTCTACGA TTGTGTAGTC
TTCTACGACG GTACTGATTA TCAAGCTGTC GTTGACGTAC ACGAAACGGG TGATTTGCGA
AACGCTCAGC CCTTTACGAG CTTTGCCAAA TCTCGACAAT TTGGTACCCT GGGAACCATT
GATCAAATGA ATTACGCCGT ACAGTTTTAC AACCAAGGAA CCATACTCAG TTTGGTGACG
GACGCCTCTC CGCACGGTAC GCACGTTGCT GGGATTACGG CCGCCGCCGA AGGTGAGCGC
AGCGGAGTGG CTCCCGGAGC CCAATTGGTT TCGTTCAAAA TTGGCGATTC ACGACTGGTA
CGTATCGCTT TCGAGTCCGA GGCACCAACG AGTAGCTACA CTTTGTCTGT TTGTGGTTTG
CAACCGGTGG GAAACCAGCA AGCAAGTGGC CAGTCATGGT AGACTCACAC ACGCACTTAT
CCTGTCATTC TTTTAGGGAA GTATGGAGAC AGGAACTTCC TTGACGCGAG CAATGATTGA
AGCCGTGCGG CACAAATGCG ATGTCATTAA TCTGTCATAC GGAGAGGGGT GTGCAATGCC
CAATCATGGT CGATTCGTCG AGCTTGCCGA AGAACTCGTG TGGAAACATA ACGTGGTCTT
TGTTTCCTCG GCGGGAAACA ACGGGCCAGC TATTTCCACG GTAGGAGCCC CGGGTGGGAC
GTCGTCGGCT TGCATCGGTG TCTCCGCGTA CGTGTCACCC GCCATGATGA AAGCTGGTTA
CAGCATGCCC GTCGACAATG TTGACGACAA GATTTCGTCC ACCGAAACCG GTACTACTCC
GGACGAGCCA GATGCAGAGT ACCATACCGG TACGACGTAT ACCTGGAGCA GTGTCGGGCC
AACAGCAGAC GGTGACAACG GTGTTGACGT GACGGCACCC GGTGGCGCCA TTACTTCAGT
TTCAAACTGG TGTTTGCAGA AATCTATGCT CATGAACGGT ACCTCGATGA GCAGTCCGCA
CGCCACGGGG TGTGTGGCAC TCCTGATTTC CGCGTGCAAG GCTGAAGGCA TTCCCGTATC
TCCGGCACGC ATCCGTCGAG CGCTACAAAA TTCGGCCAAA CGTCTGCCAA ACCTGTCGAC
GCTGCAGCAA GGATGGGGCA TGATTCAGGT GGATCGTGCA TTCGATTATC TGCAGGCCAA
CAAGGACGAC GACACCGAAG ATATCTATTT TGATGTTCGA GTGGCCAACC GCAGTGGTTC
ACCTCGTGGA ATCTATCTGC GACAAGCAGA CGAATCAGCG ACTCGACAAA ACTTTGCCAT
TCACGTGGAC CCAAAGTTTC GTCCAGAAGA CGACATCAGT ACAGATAGTC AGCGACGCAA
AATTGACTTC GAAATGCACT TCCAAATCGA AGCGTCCGAG CCATGGGTGA CAGTTCCCGA
CCACTTCATG CTGATGAATA ATGGACGCAC GTTCAAGATT GACGTGGATC CAACTGGATT
GGAGCCTGGC GTACACACGG CGAGAGTGTA TGGTCTTGAC TCACGAAAGC CAAGCCGTTG
CGTGGTGTTC TCGATTCCAA TAACAGTGGT TAAACCTATG GAGACGAAGC ACGACATCTC
ACTGGGCGCA TTAGAGTTCA AACCAGCCGA GATAAAGCGG TTCTTTGTAA GGCCTCCCTT
GGGATCGACG TGGATGGACA TTACAATTCG TGACCTTCGA GATGCGAATA TAGATGGGGA
GTCGTCGACA AAGCTCATAG TGTTGCATAC GGTACAACTG CTGCCACATG CTGCGTATCG
CGATTTTGAA CAGCAAAAGC ACTACAACCT TCGGCCCTCG CAAACTGTTG TTGCATCCAT
TGCCGTGGAG GATGGGATAA CCTGCGAGAT TGACTTGGCA AGATACTGGT CCACTCTCGG
TACAACGAAA GTTGATGTAG AGATTCAATT TCGTGGAGTT CGTCCCGTGC CCAACAAAAT
GACATTACGC TGCGGGGAGG GCGGTTCACT GGTGCGGGTA CACAGCGACT TGGCGGATGA
GACCATCAAT CCAGTCGCTA AACTAACAAA ATGGCTTACT CCGTTACGTC CCAAAGCTGG
TGCCGCAATC AAGCCAATGG GACCCCGTGA CACCCTCCCG TCACGCAACA AAGAAATATA
TGAGTTGGTG TTGACGTACG AATTCACTCA GGAAGAAAAA GGCTCATTGA TTCCTCGAGC
TCTTGGAATG CAAGGGATCC TATACGAATC TGTCTTTGAA AGCCAAATAA TGCTTCTTTT
TGACGGTGAA AAGAAATATC TCGGAGTTGC TGATGCCTTC CCTTCATTCT TAACGGTACC
AAAAGGATCG GTCACCATTC GTATGCAAAT TCGCCACGAC GATCCGTCGA AGCTCGAAAA
TTTGAAAGAC ATGCCAATCT GGATTGAACG CAAATTGGAA AAGGAAATTG CGTTGTCTGT
GTATTCGTCC AGAGAAGGAG TCATGTCGGG GGCTGCTACT TTTCGGAAAC GTGTGCTACA
TAAAGGATCC GGATGCTCCG TCTTTTTCGG CGAACCAGCG TCATCAAAGC TCCCTGCTTC
TGCCAAGACA GGAGATCTTT TGACAGGTAA CTCCACTTTC GGATCCGCCG ATGCGTCGCT
CCCTGGCACC GGCAAGCGTC CCGGAGGATT TCCTCTCGCG TACTGGATTG GACCAAAAGC
AGAAAAAACG ACGACCGATT CGGAAGCGGT TGAGCCAAAA GATGAACGCA CTCCGGAGGA
AAAGATGAAC GATGCGGTTC GCGATTTGAA GGTCGAGCAC TTGGGCAAGA TTCCTGCAAC
AGATAAAGAA GTAAATTCAT TCAATGAGTT GTACGCCAAA CTTGAACAAG AATTCTCTGA
TCACCTACCT TTGCGAATGA TCAAGCTCAA GTATCTTGAA TCGCGGAAGG ATCGTGTCGC
AATTTTGGAC GATATTGTTC AAGTCAGTGA GGCTATTGTG GGTTTGATCA ATGAAGACGA
ACTTGCCCTT CACTTTGGAC GAAAAAGTGA TTCTGAGGAC TCAGCAGCAG TTAGGGTACG
AAAGAAATTT TGGCTACCAC TCATTATGAA CAAATCCAAA CTTACACAGC TGCCTTGTTT
TTCCCCAATG TTTAAACAGG ATCGTAACGA AATGAAGGAA AAGAAAAGCA TCTTGACGGA
AGCTCTCGCT CGCATGGCCA TGGCATACGC TGACATAAAA ACAGAGGAGG CCAAGCCAAA
GTTTGACGAA ACATTGAAGA AATTGAAAGC GTGGGTAGAT CTTGATTCGA CGTCGAAATA
CACTCCCTTG GTACTTGAAA GGGAAGAGCG TGCGGGTCGG TACGGAATAG TATTGAAACT
CATCAGCAAA TTGCTATCAA AAGAGGTAAA AGAAAAGGAC TTTGTGAAAC CGCTCTCCAA
GCGCGATCTA CTGGAAAAGC GTGCCATAAT CTTGGGAACG CTTGGTTACT CAATTTTGGT
GGAGCACGAT AAGAAAACTC GAGTGATTGC CTGTCCGAAA GCGTACGCTC TTTTTTAGAA
ATTTGCGGAA CAGCAAACTA GTAAACAAGA AAGCAGTTAC
|
|---|
| Protein sequence | MTETNVPTIP FPLIDLVPKK ETNVRRFLEA YPEYDGRNVI VGILDTGVDP GAHGLGTLPD
GTTPKLLNVV DCTGSGDVDV STQVELQRHV NADADDGSDG NVHDANGNDT AVDDTPTPLT
TPLPQVRLGV KRAYELFPAK LRERVQETRR QAFQAQLDRY VVDVRQQLAA WNVAHPKPPT
SPEEAKVRDD LQARLDVLLD SEWNDDPGPL YDCVVFYDGT DYQAVVDVHE TGDLRNAQPF
TSFAKSRQFG TLGTIDQMNY AVQFYNQGTI LSLVTDASPH GTHVAGITAA AEGERSGVAP
GAQLVSFKIG DSRLGSMETG TSLTRAMIEA VRHKCDVINL SYGEGCAMPN HGRFVELAEE
LVWKHNVVFV SSAGNNGPAI STVGAPGGTS SACIGVSAYV SPAMMKAGYS MPYHTGTTYT
WSSVGPTADG DNGVDVTAPG GAITSVSNWC LQKSMLMNGT SMSSPHATGC VALLISACKA
EGIPVSPARI RRALQNSAKR LPNLSTLQQG WGMIQVDRAF DYLQANKDDD TEDIYFDVRV
ANRSGSPRGI YLRQADESAT RQNFAIHVDP KFRPEDDIST DSQRRKIDFE MHFQIEASEP
WVTVPDHFML MNNGRTFKID VDPTGLEPGV HTARVYGLDS RKPSRCVVFS IPITVVKPME
TKHDISLGAL EFKPAEIKRF FVRPPLGSTW MDITIRDLRD ANIDGESSTK LIVLHTVQLL
PHAAYRDFEQ QKHYNLRPSQ TVVASIAVED GITCEIDLAR YWSTLGTTKV DVEIQFRGVR
PVPNKMTLRC GEGGSLVRVH SDLADETINP VAKLTKWLTP LRPKAGAAIK PMGPRDTLPS
RNKEIYELVL TYEFTQEEKG SLIPRALGMQ GILYESVFES QIMLLFDGEK KYLGVADAFP
SFLTVPKGSV TIRMQIRHDD PSKLENLKDM PIWIERKLEK EIALSVYSSR EGVMSGAATF
RKRVLHKGSG CSVFFGEPAS SKLPASAKTG DLLTGNSTFG SADASLPGTG KRPGGFPLAY
WIGPKAEKTT TDSEAVEPKD ERTPEEKMND AVRDLKVEHL GKIPATDKEV NSFNELYAKL
EQEFSDHLPL RMIKLKYLES RKDRVAILDD IVQVSEAIVG LINEDELALH FGRKSDSEDS
AAVRDRNEMK EKKSILTEAL ARMAMAYADI KTEEAKPKFD ETLKKLKAWV DLDSTSKYTP
LVLEREERAG RYGIVLKLIS KLLSKEVKEK DFVKPLSKRD LLEKRAIILG TLGYSILVEH
DKKTRVIACP KAYALF
|
|---|
| |