Gene PHATRDRAFT_26742 details

Gene Information

• Locus tag: PHATRDRAFT_26742
• ID: 7200191
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 278219
• End bp: 281888
• Gene Length: 3670 bp
• Protein Length: 953 aa
• GC content: 48%
• Product: beta-glucosidase
• Protein accession: XP_002179173
• Protein GI: 219116757

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CATCTTCGTG TCGCGCAGCC TATCCTTCCA CGCATTTTTT AGTGCCAAAC CCTGTTTCAT 
CAAAGATACG ATTTGCTGTA TTTACCCAGT TGATAACACT GCGAGAATGG TGGCGGAAAA 
CAAATCCAGG CAGATTGATT CTTCCTTCCG GAACTTGAAG AGAAAAAGTC AAATTGAAGA 
AATGCTTTCC TCCATGACTA TCGAAGAAAA GATAGGGCAA ATGTCCCAGA TTGATATCAA 
CATGATTATC GAAGACGATT CCGAAGGTAA TGGAAAGAAA CGGCTGAACG TGGCCGCCGC 
AGAACTTTAC CTCGGTGAAC GTGGAATCGG ATCTGTCCTC AACCTTGTAA GTGGCGCTTC 
CTGGACCGCG CAAGATTTTC GTCAGGTCGC CGTGCAATTG AAGGAAATCA GCGACCGCTA 
CAACCGTCCA CCCGTAATTT GGGGTCTAGA TAGTGTGCAC GGGGCAAATT ACATTCTTGG 
AGCAAGTATT CCACCGCAAC CCATCAACAT GGCCGCAACC TTTAACTTAA CAGTTCCCTA 
CCAGGCTGGC ATTATTGCGA GTCGTGATAC AAGGGCTGCC GGTATCACGT GGTTATTCTC 
GCCGCTTTTG GGTATTGCTT TGGAGCCACG TTGGAGCCGG GTCTACGAAA CCTTTGGGGA 
AGATCCTACG ATGGTTGGTC TCATGGCGGC CCAGATGATT GCCGGCATTC AAAAACCGGA 
TTCGAATCCT TTGGCCATCC CTTCCAGGGC AGCCGCTTGC GCTAAACACT TTATTGGCTA 
TTCCATGCCG CGCGATGGTC ATGATCGTAG TCCAAGTTGG ATTCCCACTC GCCACTTGTA 
CCAATATTTT GTCCCACCGT GGCAGTATGC AATGAAGCAA AACGCACTCA CCGTGATGGA 
ATCATACACG GAAACAGACG GTGTACCCAA CGTCGCAAAT CCTCAAGCGC TGAACTATCT 
ACTGCGTCAG CGTTTGGGTT TTGATGGCGT TCTTGTGACC GACTATGAGG AGATTCGCAA 
TGCAAATACA TGGCACCACA TCGCTGTGAA TGACACACAG GCAACTATCA AGTCGTTATT 
GGATGGTAGC GTGGACATGA GTATGATTCC ATGGGACGCG GATGGATTTC GCGATGGAAT 
TTTGGCAGGA ATTCAAGGCC ATCGGTTGTT TGAATGGCGA TTGAACCAAT CAACGGAGCG 
TGTCCTAAAG CTGAAGGAGA CCCTGAACAT GTATCACGAA AATCTCGCGA TAGAAGATCC 
CAATCTTGCA ATGATTGGTT CGGACGAACC GGCGGTCTTG GACATGGCCC AACAATCACT 
CATTCTAGCA GAGAATGATG GGTTGTTGCC TTTGAGTTTA AATACTCGGC ACAAGATTCT 
CGTGACTGGT CCAACGTCAA GCTCGTTGAT ACATCAGTCT GGGGGTTGGA CTGGTCAGTG 
GCAAGGGGCT TTATCTGACG ATTGGTTTGC CCATGGATCA ACAGTATTCG ATGCCTTTTC 
ACGGGAAGAG GCCTGGGATG TTTCCTTTAG TTGTGGTGTC AATATTTTGG GCGGTGAATG 
CGATGACGAA GTGAGTCGCC AGAAAACTTT TTTCATCGAA GAGATCGAAG AATGGGTCGG 
AAGGGGACCT TCAACGTCCA TCGAGCGTGC AGTCAAAGCG GCAGCATCGA AAGACGTTGT 
GCTGGTGTGC GTCGGCGAAG AAGCTTACAC CGAGAAACCT GGTGACATAC GGTCTATGGA 
GCTACCACAA GGACAATATG AACTGGTGAA AGCGCTCAAA GAGAACTCGG TTGTCAAGAT 
TGTACTTGTA TACTTTGGTG GACGTCCAAG GCTGCTAAGG AAAATGGTCG AGCAGGCGGA 
CGCAACCATT GTGGCTTTCC TGCCTGGACC GACAGCGGGC GAAGCGCTGA AAAATTTAGT 
TAGCGGGCAA ATCAATCCTA GCGGCAAAAT GCCCATTACG TATCCTAAGT ATTCGGACAA 
CGGAGGCATC CCCTACTTCC ATTCCGTGTC GGACAAATGC ACTGATGGGT TAGCTGCCAT 
GCCACATTTC GATTATGTCC CTTGTGAAGT GCAGTGGTCG TTTGGGCACG GTCTGAGCTA 
CACTAGCTTT CAGTATTCTG ATCTAAAGTC ATCCGCTAAA GACGGTAGTG ATTTGATCGT 
CTCAGTCAGA ATTAAAAACA CTGGGTCAAC GGGTGGGTCA GAAGCGGTCA TGCTTTTTAC 
GTTTGACGAA AATCGACCCA CTACTCCAGA ATACAAGAGA CTTCGGGCTT TTGAAAAAAT 
TTGGCTTGCC TCAGGAGAGG AGAGAACAGT CACACTCACA GTCTCCCCTG AGGAGCTCCA 
CTTTATTGGC CCCCATAATG ACAAGCACTA CATCAGTGAT CCTGCTATGA GGTTTTGGGT 
AGGCATGGGA GCTTCAACGG ATTGTCGCTC AAATCCCGAT TCAGATCTCT GCTCTATTGT 
TGAGCCCTCC GTCGGAGAAG AGGCCATGTT CAATAATTGC TGCGATGTGG CGTGTGACTT 
GTGGACGAGC AGCCAATGTG CCGACCAATA TGGCTTCGAT CAAGCTTCCT GCTTAGCGCT 
TTGTTCTTCA ATCAGTAGCT ACCCGACTAG TGCTACTACC TTGGGCAAAG ACGGCTGGGG 
CTGGAACTAT GTCGAATGTC TTGAATCTGT GCTGTGGGGA TTCGAGCAAG TAAATGAATT 
ACCACAGTGC TGGAAGATGA CCACATTGTG TCGTGATGTT TTCCAAACAA AAAACTTTGA 
CGAATATGGC CTTGGACCCG GAATCACACC ACAAAAGATC CTGCCAAGGG GCGTCACCTG 
GATGCCGAAC GCAGTGGCCG TAATAGCAGC TTTGATTTCA TCCTATATGA TGGCTCAGGC 
GATGCGTGGT GGATTTTGTA GACGAACGGA TGAATCCAAT GAGAGAGATG CCATTCAATT 
TTCGAGAGTA CAGACGGAAC AGGACTAATG TCAAAAGCTC AAAATTGTGT TTCTTGGTAC 
TCATGGTGGC ACTATAGAGA AAAATGTGAA AATTTCCTTT GTTGTATTGA AAAAAAGTCA 
CGCAGCTTGC TCCAAACGCA TATCAAATAA CCCACAGAAT CTGATGACGA AGCTATTTGG 
ATTTCTGTAG AAGAAAGTCA CCAATGGATG AGAGTCCTCG ATTGACGATG CGCATTTTAC 
TCGCAGTCAA TATTAAATAC ATTGTTCAAG TAATCTCCAC ATCGTCCTTA GCAGGATTGT 
GCTTAAAACG TACACTCCAT TTCAATGTCT TAAAACAGCT GGATGAATGT CAGATGCATC 
TTGGAATGAA CGAAGTAAAT CAAGTTCCAT AGTCTTGACG CCACAACCGT CTGAACAAAA 
AACAGAGTCA AATCTCGGCT TGTTGCCGCA GAATTGAGCT GCGCAACATG AGTAGGAGGG 
CGTGATATTT GCATTTGAAC CGTCGCAGGC TTCACCTTGT AGTTCTGCCT TGGCGTCTTC 
GTCACCGACT GCCCTATTTT TCAAGATTGG AGGATCTTCA GCTGGATCGA AAAAGTTGCG 
TCTCTGGTTT TCGAAACCTG CCGGGCTTTC TCTAGATGTG TCTCTCATGA GAAAGAGAAG 
CATATTGTGC CGGTCTGTAT AGCCTTCGGC ATCTTCAATT GAAACAAGCA GTCGTTCTAG 
CTCCTTTGTT 

 

Protein sequence

MVAENKSRQI DSSFRNLKRK SQIEEMLSSM TIEEKIGQMS QIDINMIIED DSEGNGKKRL 
NVAAAELYLG ERGIGSVLNL VSGASWTAQD FRQVAVQLKE ISDRYNRPPV IWGLDSVHGA 
NYILGASIPP QPINMAATFN LTVPYQAGII ASRDTRAAGI TWLFSPLLGI ALEPRWSRVY 
ETFGEDPTMV GLMAAQMIAG IQKPDSNPLA IPSRAAACAK HFIGYSMPRD GHDRSPSWIP 
TRHLYQYFVP PWQYAMKQNA LTVMESYTET DGVPNVANPQ ALNYLLRQRL GFDGVLVTDY 
EEIRNANTWH HIAVNDTQAT IKSLLDGSVD MSMIPWDADG FRDGILAGIQ GHRLFEWRLN 
QSTERVLKLK ETLNMYHENL AIEDPNLAMI GSDEPAVLDM AQQSLILAEN DGLLPLSLNT 
RHKILVTGPT SSSLIHQSGG WTGQWQGALS DDWFAHGSTV FDAFSREEAW DVSFSCGVNI 
LGGECDDEVS RQKTFFIEEI EEWVGRGPST SIERAVKAAA SKDVVLVCVG EEAYTEKPGD 
IRSMELPQGQ YELVKALKEN SVVKIVLVYF GGRPRLLRKM VEQADATIVA FLPGPTAGEA 
LKNLVSGQIN PSGKMPITYP KYSDNGGIPY FHSVSDKCTD GLAAMPHFDY VPCEVQWSFG 
HGLSYTSFQY SDLKSSAKDG SDLIVSVRIK NTGSTGGSEA VMLFTFDENR PTTPEYKRLR 
AFEKIWLASG EERTVTLTVS PEELHFIGPH NDKHYISDPA MRFWVGMGAS TDCRSNPDSD 
LCSIVEPSVG EEAMFNNCCD VACDLWTSSQ CADQYGFDQA SCLALCSSIS SYPTSATTLG 
KDGWGWNYVE CLESVLWGFE QVNELPQCWK MTTLCRDVFQ TKNFDEYGLG PGITPQKILP 
RGVTWMPNAV AVIAALISSY MMAQAMRGGF CRRTDESNER DAIQFSRVQT EQD