Gene PHATRDRAFT_19831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_19831 
Symbol 
ID7199989 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp944541 
End bp945608 
Gene Length1068 bp 
Protein Length310 aa 
Translation table 
GC content52% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179544 
Protein GI219117499 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTT GGAACGATGG CAAAACGATC GCGATAGAGC GCTGCGTCTT ACCCCTCGAC 
GCTAGTCTGC ACAAGGGGTC CTCGGGTCGA GTAGGGGTGC TGGGCGGGAG TGCCCGCTAC
ACGGGAGCTC CTTACTACGC CGCAATGGCT AGTTTGCAGG CCGGAGCGGA TCTAGCCTTC
GTCTTTTGCG CACAAGAAGC GACTCTGCCG ATCAAATCGT ATTCGCCAGA ACTCATGGTG
GCACCCGTCT ACAGCGCATC CGATTTCGAT CCGGTTGTGA AGGAGTACTA CGATCTAGCA
GAAAAAGAGG ACAGTATTTC CGTTGAAGAC TTTCTGGAAC AGCACGATAC AGCCCAGCGG
TTGGTGGATG ATATGGTGAA TGAAATCGGC GACATGCTTC CCAAGCTGCA CTGTCTCGTA
GTCGGACCAG GCCTCGGGCG GTGTCCGCTC GTCATGAAAG CAGTGGCTCG CGTTTTGGAA
TTGGCGCGCT CGCAGCAGCT CCATCTTGTG CTTGATGCCG ATGCCTTGTA CATGATGAGC
TTGCCAGTCT ACCGATCCAG TTTGAAAGGT TATGACAGAC TAGTCTTGAC GCCGAACGTG
GTCGAATACC AACGACTGTT TCCCAAAAGT GAAGACAACA ACGGTGAATC GATGGAGGAT
GCGAGCGACG AAGAACTCGC TGCCGCCACG ATTGTAAGAA AAGGAGCAGA AGATAGGATA
ATCGTGGATC AAAGACAGGT CATGTCCTGT GGCGAAGAAG GAGGTCTGAA ACGATCGGGT
GGGATCGGAG ATGTTCTGGC TGGGACATTA GGGACCTTTA CCTCCTGGCA CGCAATCTTA
TTGGATAGGG AGGCAGTGAG TACAGAGGAT CTCCCTCTAT CTTGCTGGAC AGCCTGTTGT
GCCGTCAAAC GGGCAACTAA ACGTGCGTTT GACGACAAGC GCCGGGCTAT GACGGCTCCC
GACGTTTTGC ATCATTTGGG GCAGGCCCTG GATGAAATGA CTAGAGAGGA CTAGCCGACA
AGATCAATTT TAAACATAGT GTGTATAATC AAGCATATGT TACAATAT
 
Protein sequence
MKTWNDGKTI AIERCVLPLD ASLHKGSSGR VGVLGGSARY TGAPYYAAMA SLQAGADLAF 
VFCAQEATLP IKSYSPELMV APVYSASDFD PVRLVDDMVN EIGDMLPKLH CLVVGPGLGR
CPLVMKAVAR VLELARSQQL HLVLDADALY MMSLPVYRSS LKGYDRLVLT PNVVEYQRLF
PKSEDNNGES MEDASDEELA AATIVRKGAE DRIIVDQRQV MSCGEEGGLK RSGGIGDVLA
GTLGTFTSWH AILLDREAVS TEDLPLSCWT ACCAVKRATK RAFDDKRRAM TAPDVLHHLG
QALDEMTRED