| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_19692 |
|---|
| Symbol | |
|---|
| ID | 7200091 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011674 |
|---|
| Strand | - |
|---|
| Start bp | 473206 |
|---|
| End bp | 474499 |
|---|
| Gene Length | 1294 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002179438 |
|---|
| Protein GI | 219117287 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CAGGGTTTTA CCATCGACCG GAAGCTCAAA GTCTGTTATC TGATCTTCAG TATCGTGTCT
TTGAAAATAT TCTTTCACTA TTAAGAGAGG GAGAAGCAAT TCTGCAAGGC TTGGACTTTC
AAAAAAAAAC CTTTTCTTCC AATTATGGCC ATTAGCTCAG CCGAAGCCGC TTCTGGAACG
CGCTTGACGA TTCGATTGCC CGACGACTTC CACCATCACT GCCGAGACGG AGCTAAGACA
GCTGCAGTTC TTCACCATGC CGTACAGCGG TTTGGGTACT GTCTAATGAT GCCCAACTTG
CAGCCTCCGG TGACGACCAC TGAGATGGCC TTGAACTACA AATCTCATAT CATGGCGTCG
ATGCCTGAGG GGTCGTTCCC ATATTTCAAG CCAGTAATGA CTTTGTACCT TACTGATAAG
ACAACACCGG ACGAAATTAA GAAAGCATCT TCGTCAGGAG TTGTTGGATG CAAGTTTTAT
CCAGCTGGGG CCACAACAAA TTCTGCCTTG GGTGTAACGG ACATAAAAAA CTGCTATCCT
GCGTTGCAAG AAATGAGCGA CCAAAATATG ATGTTGTGCA TTCATTCCGA GGTAACTCAT
GCAGATATTT TTGACCGAGA ACCTGTATTC ATCGAAGAAA TTATGACACC GTTAGTGACC
GACTTTCCGA ATCTCAGGAT TTCCATGGAG CATATAAGTA CAAAAGAAGC AGTTGATTTC
GTTCTCTCCT CTCCTGACAA TGTCAAGGCG AGCATAACTT GCCACCATTT GCTTTACAAT
CGAAATCGTG AGTATAAGGA CGTGGGAATG GGAACCATCC TGTGTAATGG ACTTTTTATC
TTATATCACC TTTTCCTCTG CTTTAGACAT GCTTGTAGGC GGCATTCGAC CCCATCTATA
CTGTTTACCG ATTCTCAAAG CGGAAATTCA TAGATTGGCA CTAGTTAAAG CTGCAACATC
TGGAAGTAAG AAGTTTTTTC TTGGAACCGA CTCAGCACCA CATTCGACGG ATATGAAAGA
GGCTTTTTGC GGATGCGCTG GAATTTTCAC GGCTCACGCT GCGGTTGAGT TGTACGCTGA
AGTTTTCGAT AAAGTCGGGG CTTTGGACAA GCTTGAGGCT TTTTGTAGCA GCAACGGCGC
GGACCATTAT GGCCTTGAAC GAAATACTGC AACAATTACT TTGGAAAAGA AATCTTGGAG
GGTTCCGAGA ACGTTTGATT TCGGTGACGG AAAGGGTGTA ACACCCCTTC GAGCTGGAGA
AGAAATTAAA TGGTCCATTG CTGCACAGGA ATAA
|
|---|
| Protein sequence | MAISSAEAAS GTRLTIRLPD DFHHHCRDGA KTAAVLHHAV QRFGYCLMMP NLQPPVTTTE
MALNYKSHIM ASMPEGSFPY FKPVMTLYLT DKTTPDEIKK ASSSGVVGCK FYPAGATTNS
ALGVTDIKNC YPALQEMSDQ NMMLCIHSEV THADIFDREP VFIEEIMTPL VTDFPNLRIS
MEHISTKEAV DFVLSSPDNV KASITCHHLL YNRNHMLVGG IRPHLYCLPI LKAEIHRLAL
VKAATSGSKK FFLGTDSAPH STDMKEAFCG CAGIFTAHAA VELYAEVFDK VGALDKLEAF
CSSNGADHYG LERNTATITL EKKSWRVPRT FDFGDGKGVT PLRAGEEIKW SIAAQE
|
|---|
| |