Gene PHATRDRAFT_19647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_19647 
Symbol 
ID7200337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011674 
Strand
Start bp343844 
End bp344908 
Gene Length1065 bp 
Protein Length354 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002179409 
Protein GI219117229 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.945808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTCCGA CGAACAATCA GCTGTACAAA ACCCGTCAAT TGACGGGTGC CAAAGCACCC 
AAGGCCAAGG TCGCCCGTTA CCTCAAATCG ACCGAAGCGG TCCTACGCGA GCCCGGAAAG
AACGCTCTTC TACTGCAGGG GATTTCTTGT TCCCAAACCA TGACCCAAGT TCTGAAAGAA
CTGCGGGCCG TCCAGGCGCC ACGCGCCAAA CTACTGACCA AAAAGAACCA AATTGTGCCC
TTTTCCACGT CCGGACAACA AAGTTTGGAA TTTTTAACCA CCAAAAATGA TTGCGCTCTA
CTTGCATTGG CGTCGCACAA CAAAAAGCGC CCCAACAATC TGATTTTGGG ACGCACCTTT
GATCGGACTA TACTGGATCT GTGTGAACTC GGCGTCCTGC GATTCAAGTC CATGCACGAT
TACGGCGGCA GTGTGCCCAA AAAACGAATC GGCAGCAAAC CATTGTTACT CTTTGTGGGG
GACGGCTGGG AACAAAGCAG TAATCTGGAT GCAAGAAATT TACGGAACCT GCTTGTGGAT
TTCTACCGTG GTGATGTTGT TGACAAGCTT ACCTTGAGCG GCATCGACCA TGCGATCGTT
TTTACCTGGG CCGACGTAGC TAGTAGCAAT GGAATCGCTA GTCGGTCACT GATTCACCAA
CGCACATACT TTGTCAAATT GAAGAAGAAT GTGAACAGCA GCATTAATAG TTCTGCGCCG
TTGCCGCAGT TGATTCCGTC TGGCCCGGAT CTGGATTTGG TGGTGCGACG ATCGCAGTGG
GCCGAATCGG ACCTATACCA GGCCGCACGC AAACAGCCGT CTTCGGCCAA GCCTAAAAAG
ACCAAGAATC ATTCTACCAA CATGTTTGGG GAAACCATTG GTCGCCTGCA TGTAACCAAG
CAAGATGTGG ACGGACGACA AGGACGCAAG GTCAAGGCCC TGCGACGGGC AGAAAAAATC
GCGAACGTTG AAGAAAAAGC CGCAATCGAA GCCGAGCTGG AGCAGGAAAA ATCGGAAATG
TCAACGGAAT TCAAAGCGAC CTTTGGCTTT GCCGAAAATC AGTAG
 
Protein sequence
MAPTNNQLYK TRQLTGAKAP KAKVARYLKS TEAVLREPGK NALLLQGISC SQTMTQVLKE 
LRAVQAPRAK LLTKKNQIVP FSTSGQQSLE FLTTKNDCAL LALASHNKKR PNNLILGRTF
DRTILDLCEL GVLRFKSMHD YGGSVPKKRI GSKPLLLFVG DGWEQSSNLD ARNLRNLLVD
FYRGDVVDKL TLSGIDHAIV FTWADVASSN GIASRSLIHQ RTYFVKLKKN VNSSINSSAP
LPQLIPSGPD LDLVVRRSQW AESDLYQAAR KQPSSAKPKK TKNHSTNMFG ETIGRLHVTK
QDVDGRQGRK VKALRRAEKI ANVEEKAAIE AELEQEKSEM STEFKATFGF AENQ