Gene PHATRDRAFT_11785 details

Gene Information

• Locus tag: PHATRDRAFT_11785
• ID: 7200338
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011674
• Strand: +
• Start bp: 349841
• End bp: 351868
• Gene Length: 2028 bp
• Protein Length: 631 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002179192
• Protein GI: 219116795

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.222713
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

CAGCGACAAA CGTGGAACGA TCAAAAACGA GTCATTCATG GCACTATTAA TCGTCTCAAT 
CTCCAAACAA TAAAACCGCT CGTCCATGAC TTATTCGCCA AAGTTAATCT TGTTCGTCTC 
CGTGGCGTCC TGGCGAAATC CATTCTCCAA GCCGCCGTCA GTGCACCCAG CTACAATGCC 
GTCTATGCCG CCCTCGTGGC AGTCCTCAAC ACGAAATTGC CAGAAGTGGG TGAACTCGTC 
ACGATCCGGG CCATTCTGGC CTTTCGAAGG CATTTTCGGC GGCGGGAAAA GACTTCCTGC 
GTGGCTATGG CTCTCTTTCT TGGCCACCTG TTCCATCAGG CCGTCACCCA CGAATTGCTC 
ATTTTGCAAA TCTTGACGGT ACTCTTGGAC GGGGATCCGA CGGACGATTC CGTCCAAGTC 
GCGGTGCAGC TCTTGAGCAC CACGGGTTAT GCCTTGTTGG AAGTCACACC GGCGGGAGTC 
CGTGCGGTTT TGGAACGTCT CCGTGGACTG TTGCATGAAG GGTCGCTGAG CTCACGAGTC 
GAGTACCAAA TGGAAACTCT ACTCAAGTTG CGCAAGGAAG GCTTTCGCTC GCATCCACCC 
ATTCCGAAAG AATTGGATTT AGTCGAACAG GATGATCAGA TCACGTTCGA GATCAGCTTG 
GATGATGAAG ATCTTCGAAA GCAGGAAGAG TTGGATGTGT TTGCGGTCGA CCCGGAGTAT 
GCGCAAAATG AAACCGAATG GGGTATCATA AGGGCCGAAA TTTTAGGATT AGGTAGCGAT 
GATGATGAAG AAGAAGAAGA AGACTCCAGT TCCGGGGAGA GTGGTGACGA AGACGGAGCT 
GGCGACGATA ATGAAGGGGA GTTCGAGACG GAAGAGGCCA TTGTTTCTGT AGACCAGAAC 
AGTAAGCATG GCACAGTCGT GGTGCGAGAC TTATCCGAAG CCGATCTGGT TCATTTACGT 
CGGACTATCT ATTTGACAAT CATGTCGAGT GCTACGTTCG AGGAATGCGC GCACAAACTA 
GCCAAGGTTG ATATTCCAGA CGGTCGTGAA GAAGAGCTTA TTAATATGCT GATTGAATGC 
TGTTCTCAAG AGCGTACGTT CTTGCGCTAC TACGGATTAA TCGCGTCGCG ATTTTGCTTG 
CTACATGACC GCTGGAAGAA TGCATTTATG GATGCATTTG CCCAGCAGTA TACAACAATC 
CATCGACTGG AGACGAATAA GCTGCGCAAC GTGGCAAAGC TTTTCGCACA TTTATTACAC 
ACGGATTCGA TGCCTTGGAG CGTCCTAGCC ATTGTTCGTT TGAATGAAGA CGAGACTACT 
TCATCCAGTC GTATCTTTGT CAAGATTCTT GTTCAGGAAA TGGCGGAAGC TCTGGGTATC 
GCCAGTCTTA AGGAACGACT AGAAACGGAC GATCTTGAAA TGGCTGAATG GTTCAAAGGA 
ATGTTTCCTC GTGATAACGT GCGAAATACG CGGTACGCAA TCAATTTTTT TACTTCGATC 
GGGCTGGGTC CTCTCACCGA TGGGCTGCGC GAGTTTTTAA AGAATGCTCC CAAATTGATC 
ATGCAGCAGG CCAAAGTCCC GTTGGACGGA CAAAAGGAGG ACGATTCCTC AGTTTCGTCT 
TCTAGTTCTA GTGATTCCGA GAGCAGCTCG TCGCTTTCCT CTTCTTCAAG CTCTAGCTCG 
GGAAGCTATT CTTCTTATTC AGATAATCGT CGAGAAGGAC GATCTCGTGG ACGGCGTAGA 
AGGGATCGGT CTAGGTCCCA TTCTCAGTCT TCTCGAAGTG CATCGTCGCG AAGTAGCTAC 
TCGAGGTCTT CATCACGCTC GCTGTCGAGG TTTCCTTCGC ACCCGAAAAA TACACGGGGT 
GCTCAAAGGC GTCGACCATC CGTTTCGTCT CGGGATTCGA GAAGGTACAG CTCTTCCTCA 
TCAGCAACGA AACAGGTAGA GCAGCAGGGC CGTTCGCGAT CGGTGGATTC TTTTGGTCGT 
GAACGACGGG GCTCTAATGC CGCTATCGAT CGACGTTTAA GAAAATAG 

 

Protein sequence

QRQTWNDQKR VIHGTINRLN LQTIKPLVHD LFAKVNLVRL RGVLAKSILQ AAVSAPSYNA 
VYAALVAVLN TKLPEVGELV TIRAILAFRR HFRRREKTSC VAMALFLGHL FHQAVTHELL 
ILQILTVLLD GDPTDDSVQV AVQLLSTTGY ALLEVTPAGV RAVLERLRGL LHEGSLSSRV 
EYQMETLLKL RKEGFRSHPP IPKELDLVEQ DDQITFEISL DDEDLRKQEE LDVFAVDPEY 
AQNETEWGII RAEILGLGSD DDEEEEEDSS SGESGDEDGA GDDNEGDKHG TVVVRDLSEA 
DLVHLRRTIY LTIMSSATFE ECAHKLAKVD IPDGREEELI NMLIECCSQE RTFLRYYGLI 
ASRFCLLHDR WKNAFMDAFA QQYTTIHRLE TNKLRNVAKL FAHLLHTDSM PWSVLAIVRL 
NEDETTSSSR IFVKILVQEM AEALGIASLK ERLETDDLEM AEWFKGMFPR DNVRNTRYAI 
NFFTSIGLGP LTDGLREFLK NAPKLIMQQA KVPLDGQKED DSSVSSSSSS DSESSSRDRS 
RSHSQSSRSA SSRSSYSRSS SRSLSRFPSH PKNTRGAQRR RPSVSSRDSR RYSSSSSATK 
QVEQQGRSRS VDSFGRERRG SNAAIDRRLR K